Protein–RNA interactions for Protein: P02708

CHRNA1, Acetylcholine receptor subunit alpha, humanhuman

Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1P02708 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CHRNA1P02708 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CHRNA1P02708 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CHRNA1P02708 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CHRNA1P02708 HNRNPFP1-201ENST00000391730 1133 ntBASIC18.63■□□□□ 0.57
CHRNA1P02708 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC18.63■□□□□ 0.57
CHRNA1P02708 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC18.63■□□□□ 0.57
CHRNA1P02708 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC18.63■□□□□ 0.57
CHRNA1P02708 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC18.63■□□□□ 0.57
CHRNA1P02708 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC18.63■□□□□ 0.57
CHRNA1P02708 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC18.63■□□□□ 0.57
CHRNA1P02708 RARRES2P8-201ENST00000566335 367 ntBASIC18.63■□□□□ 0.57
CHRNA1P02708 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC18.63■□□□□ 0.57
CHRNA1P02708 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
CHRNA1P02708 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
CHRNA1P02708 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CHRNA1P02708 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC18.63■□□□□ 0.57
CHRNA1P02708 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
CHRNA1P02708 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC18.63■□□□□ 0.57
CHRNA1P02708 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC18.63■□□□□ 0.57
CHRNA1P02708 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
CHRNA1P02708 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CHRNA1P02708 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC18.63■□□□□ 0.57
CHRNA1P02708 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC18.63■□□□□ 0.57
CHRNA1P02708 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CHRNA1P02708 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CHRNA1P02708 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
CHRNA1P02708 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CHRNA1P02708 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC18.62■□□□□ 0.57
CHRNA1P02708 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CHRNA1P02708 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CHRNA1P02708 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CHRNA1P02708 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC18.62■□□□□ 0.57
CHRNA1P02708 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC18.62■□□□□ 0.57
CHRNA1P02708 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
CHRNA1P02708 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC18.62■□□□□ 0.57
CHRNA1P02708 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
CHRNA1P02708 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC18.62■□□□□ 0.57
CHRNA1P02708 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC18.62■□□□□ 0.57
CHRNA1P02708 AC069335.1-201ENST00000489972 472 ntBASIC18.62■□□□□ 0.57
CHRNA1P02708 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
CHRNA1P02708 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CHRNA1P02708 AC015911.4-201ENST00000588022 1070 ntBASIC18.62■□□□□ 0.57
CHRNA1P02708 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
CHRNA1P02708 Z92544.3-201ENST00000624747 417 ntBASIC18.62■□□□□ 0.57
CHRNA1P02708 AKAP8P1-201ENST00000434743 1349 ntBASIC18.62■□□□□ 0.57
CHRNA1P02708 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CHRNA1P02708 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC18.62■□□□□ 0.57
CHRNA1P02708 AC012569.1-201ENST00000591191 1524 ntBASIC18.62■□□□□ 0.57
CHRNA1P02708 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
CHRNA1P02708 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CHRNA1P02708 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC18.62■□□□□ 0.57
CHRNA1P02708 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CHRNA1P02708 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CHRNA1P02708 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CHRNA1P02708 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
CHRNA1P02708 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC18.62■□□□□ 0.57
CHRNA1P02708 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CHRNA1P02708 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
CHRNA1P02708 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CHRNA1P02708 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
CHRNA1P02708 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CHRNA1P02708 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC18.61■□□□□ 0.57
CHRNA1P02708 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CHRNA1P02708 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CHRNA1P02708 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC18.61■□□□□ 0.57
CHRNA1P02708 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
CHRNA1P02708 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
CHRNA1P02708 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CHRNA1P02708 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CHRNA1P02708 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC18.61■□□□□ 0.57
CHRNA1P02708 FAM86GP-201ENST00000448322 971 ntBASIC18.61■□□□□ 0.57
CHRNA1P02708 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CHRNA1P02708 RN7SL589P-201ENST00000481268 310 ntBASIC18.61■□□□□ 0.57
CHRNA1P02708 DUX4L27-201ENST00000554796 1261 ntBASIC18.61■□□□□ 0.57
CHRNA1P02708 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC18.61■□□□□ 0.57
CHRNA1P02708 INO80C-206ENST00000586489 594 ntTSL 3 BASIC18.61■□□□□ 0.57
CHRNA1P02708 AL390955.2-201ENST00000603032 514 ntBASIC18.61■□□□□ 0.57
CHRNA1P02708 AL009183.1-201ENST00000603760 355 ntBASIC18.61■□□□□ 0.57
CHRNA1P02708 AC010507.1-202ENST00000633286 381 ntTSL 3 BASIC18.61■□□□□ 0.57
CHRNA1P02708 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CHRNA1P02708 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CHRNA1P02708 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC18.61■□□□□ 0.57
CHRNA1P02708 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CHRNA1P02708 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC18.61■□□□□ 0.57
CHRNA1P02708 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
CHRNA1P02708 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC18.61■□□□□ 0.57
CHRNA1P02708 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CHRNA1P02708 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC18.6■□□□□ 0.57
CHRNA1P02708 AC026471.1-201ENST00000564629 3026 ntBASIC18.6■□□□□ 0.57
CHRNA1P02708 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CHRNA1P02708 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CHRNA1P02708 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CHRNA1P02708 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CHRNA1P02708 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC18.6■□□□□ 0.57
CHRNA1P02708 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
CHRNA1P02708 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CHRNA1P02708 CIB3-201ENST00000269878 711 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CHRNA1P02708 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CHRNA1P02708 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 40.6 ms