Protein–RNA interactions for Protein: O14917

PCDH17, Protocadherin-17, humanhuman

Predictions only

Length 1,159 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH17O14917 AC120114.3-201ENST00000611923 658 ntBASIC16.51■□□□□ 0.23
PCDH17O14917 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
PCDH17O14917 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC16.51■□□□□ 0.23
PCDH17O14917 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
PCDH17O14917 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
PCDH17O14917 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
PCDH17O14917 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC16.51■□□□□ 0.23
PCDH17O14917 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
PCDH17O14917 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC16.51■□□□□ 0.23
PCDH17O14917 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
PCDH17O14917 AC079776.2-201ENST00000641154 1609 ntBASIC16.51■□□□□ 0.23
PCDH17O14917 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
PCDH17O14917 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
PCDH17O14917 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC16.51■□□□□ 0.23
PCDH17O14917 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
PCDH17O14917 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
PCDH17O14917 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC16.5■□□□□ 0.23
PCDH17O14917 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PCDH17O14917 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
PCDH17O14917 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
PCDH17O14917 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC16.5■□□□□ 0.23
PCDH17O14917 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
PCDH17O14917 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC16.5■□□□□ 0.23
PCDH17O14917 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
PCDH17O14917 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
PCDH17O14917 AL353593.2-201ENST00000602529 1483 ntBASIC16.5■□□□□ 0.23
PCDH17O14917 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PCDH17O14917 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PCDH17O14917 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC16.5■□□□□ 0.23
PCDH17O14917 MYCLP1-201ENST00000372451 1075 ntBASIC16.5■□□□□ 0.23
PCDH17O14917 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PCDH17O14917 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
PCDH17O14917 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
PCDH17O14917 AL590627.1-203ENST00000421194 1026 ntBASIC16.5■□□□□ 0.23
PCDH17O14917 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC16.5■□□□□ 0.23
PCDH17O14917 MOK-208ENST00000519058 917 ntTSL 2 BASIC16.5■□□□□ 0.23
PCDH17O14917 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC16.5■□□□□ 0.23
PCDH17O14917 PRKN-208ENST00000610470 531 ntTSL 2 BASIC16.5■□□□□ 0.23
PCDH17O14917 PRKN-209ENST00000612485 225 ntTSL 5 BASIC16.5■□□□□ 0.23
PCDH17O14917 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PCDH17O14917 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
PCDH17O14917 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
PCDH17O14917 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC16.5■□□□□ 0.23
PCDH17O14917 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
PCDH17O14917 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC16.5■□□□□ 0.23
PCDH17O14917 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC16.5■□□□□ 0.23
PCDH17O14917 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC16.5■□□□□ 0.23
PCDH17O14917 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
PCDH17O14917 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC16.5■□□□□ 0.23
PCDH17O14917 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PCDH17O14917 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC16.5■□□□□ 0.23
PCDH17O14917 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC16.5■□□□□ 0.23
PCDH17O14917 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
PCDH17O14917 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC16.49■□□□□ 0.23
PCDH17O14917 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
PCDH17O14917 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
PCDH17O14917 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
PCDH17O14917 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC16.49■□□□□ 0.23
PCDH17O14917 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
PCDH17O14917 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC16.49■□□□□ 0.23
PCDH17O14917 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
PCDH17O14917 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
PCDH17O14917 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC16.49■□□□□ 0.23
PCDH17O14917 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC16.49■□□□□ 0.23
PCDH17O14917 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC16.49■□□□□ 0.23
PCDH17O14917 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
PCDH17O14917 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
PCDH17O14917 RAB17-203ENST00000409576 466 ntTSL 3 BASIC16.49■□□□□ 0.23
PCDH17O14917 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC16.49■□□□□ 0.23
PCDH17O14917 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
PCDH17O14917 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
PCDH17O14917 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
PCDH17O14917 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC16.49■□□□□ 0.23
PCDH17O14917 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC16.49■□□□□ 0.23
PCDH17O14917 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
PCDH17O14917 LINC00304-203ENST00000565008 1864 ntBASIC16.49■□□□□ 0.23
PCDH17O14917 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC16.49■□□□□ 0.23
PCDH17O14917 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC16.49■□□□□ 0.23
PCDH17O14917 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC16.49■□□□□ 0.23
PCDH17O14917 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC16.49■□□□□ 0.23
PCDH17O14917 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC16.49■□□□□ 0.23
PCDH17O14917 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC16.49■□□□□ 0.23
PCDH17O14917 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
PCDH17O14917 AL022326.1-202ENST00000641533 845 ntBASIC16.49■□□□□ 0.23
PCDH17O14917 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
PCDH17O14917 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
PCDH17O14917 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
PCDH17O14917 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
PCDH17O14917 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC16.49■□□□□ 0.23
PCDH17O14917 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC16.49■□□□□ 0.23
PCDH17O14917 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
PCDH17O14917 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
PCDH17O14917 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
PCDH17O14917 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC16.49■□□□□ 0.23
PCDH17O14917 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
PCDH17O14917 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
PCDH17O14917 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
PCDH17O14917 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
PCDH17O14917 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC16.48■□□□□ 0.23
PCDH17O14917 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC16.48■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 75.5 ms