Protein–RNA interactions for Protein: Q9Y5H2

PCDHGA11, Protocadherin gamma-A11, humanhuman

Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11Q9Y5H2 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC16.79■□□□□ 0.28
PCDHGA11Q9Y5H2 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
PCDHGA11Q9Y5H2 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
PCDHGA11Q9Y5H2 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC16.79■□□□□ 0.28
PCDHGA11Q9Y5H2 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
PCDHGA11Q9Y5H2 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
PCDHGA11Q9Y5H2 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC16.79■□□□□ 0.28
PCDHGA11Q9Y5H2 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC16.79■□□□□ 0.28
PCDHGA11Q9Y5H2 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
PCDHGA11Q9Y5H2 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
PCDHGA11Q9Y5H2 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
PCDHGA11Q9Y5H2 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
PCDHGA11Q9Y5H2 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
PCDHGA11Q9Y5H2 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
PCDHGA11Q9Y5H2 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
PCDHGA11Q9Y5H2 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC16.78■□□□□ 0.28
PCDHGA11Q9Y5H2 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC16.78■□□□□ 0.28
PCDHGA11Q9Y5H2 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
PCDHGA11Q9Y5H2 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
PCDHGA11Q9Y5H2 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
PCDHGA11Q9Y5H2 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
PCDHGA11Q9Y5H2 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC16.78■□□□□ 0.28
PCDHGA11Q9Y5H2 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
PCDHGA11Q9Y5H2 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC16.78■□□□□ 0.28
PCDHGA11Q9Y5H2 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
PCDHGA11Q9Y5H2 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
PCDHGA11Q9Y5H2 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
PCDHGA11Q9Y5H2 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC16.78■□□□□ 0.28
PCDHGA11Q9Y5H2 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
PCDHGA11Q9Y5H2 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
PCDHGA11Q9Y5H2 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
PCDHGA11Q9Y5H2 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC16.78■□□□□ 0.28
PCDHGA11Q9Y5H2 AC096582.2-201ENST00000510860 516 ntBASIC16.78■□□□□ 0.28
PCDHGA11Q9Y5H2 AC074051.2-201ENST00000565115 352 ntBASIC16.78■□□□□ 0.28
PCDHGA11Q9Y5H2 NT5C-211ENST00000582170 653 ntTSL 3 BASIC16.78■□□□□ 0.28
PCDHGA11Q9Y5H2 BNIP3P18-201ENST00000593976 575 ntBASIC16.78■□□□□ 0.28
PCDHGA11Q9Y5H2 AC092329.2-201ENST00000598402 547 ntBASIC16.78■□□□□ 0.28
PCDHGA11Q9Y5H2 AD001527.2-201ENST00000622994 785 ntBASIC16.78■□□□□ 0.28
PCDHGA11Q9Y5H2 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
PCDHGA11Q9Y5H2 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
PCDHGA11Q9Y5H2 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
PCDHGA11Q9Y5H2 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
PCDHGA11Q9Y5H2 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC16.78■□□□□ 0.28
PCDHGA11Q9Y5H2 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
PCDHGA11Q9Y5H2 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
PCDHGA11Q9Y5H2 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC16.78■□□□□ 0.28
PCDHGA11Q9Y5H2 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
PCDHGA11Q9Y5H2 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
PCDHGA11Q9Y5H2 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
PCDHGA11Q9Y5H2 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC16.78■□□□□ 0.28
PCDHGA11Q9Y5H2 INTS4P1-201ENST00000438455 1935 ntBASIC16.78■□□□□ 0.28
PCDHGA11Q9Y5H2 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
PCDHGA11Q9Y5H2 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC16.78■□□□□ 0.28
PCDHGA11Q9Y5H2 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC16.78■□□□□ 0.28
PCDHGA11Q9Y5H2 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC16.78■□□□□ 0.28
PCDHGA11Q9Y5H2 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
PCDHGA11Q9Y5H2 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
PCDHGA11Q9Y5H2 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC16.78■□□□□ 0.28
PCDHGA11Q9Y5H2 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC16.78■□□□□ 0.28
PCDHGA11Q9Y5H2 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
PCDHGA11Q9Y5H2 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
PCDHGA11Q9Y5H2 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
PCDHGA11Q9Y5H2 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
PCDHGA11Q9Y5H2 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
PCDHGA11Q9Y5H2 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
PCDHGA11Q9Y5H2 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
PCDHGA11Q9Y5H2 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
PCDHGA11Q9Y5H2 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC16.77■□□□□ 0.28
PCDHGA11Q9Y5H2 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
PCDHGA11Q9Y5H2 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
PCDHGA11Q9Y5H2 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC16.77■□□□□ 0.28
PCDHGA11Q9Y5H2 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC16.77■□□□□ 0.28
PCDHGA11Q9Y5H2 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
PCDHGA11Q9Y5H2 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
PCDHGA11Q9Y5H2 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
PCDHGA11Q9Y5H2 AC003669.1-201ENST00000334569 611 ntBASIC16.77■□□□□ 0.28
PCDHGA11Q9Y5H2 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
PCDHGA11Q9Y5H2 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC16.77■□□□□ 0.28
PCDHGA11Q9Y5H2 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC16.77■□□□□ 0.28
PCDHGA11Q9Y5H2 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC16.77■□□□□ 0.28
PCDHGA11Q9Y5H2 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC16.77■□□□□ 0.28
PCDHGA11Q9Y5H2 STK19B-204ENST00000512515 211 ntBASIC16.77■□□□□ 0.28
PCDHGA11Q9Y5H2 AP000867.3-201ENST00000524675 377 ntBASIC16.77■□□□□ 0.28
PCDHGA11Q9Y5H2 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC16.77■□□□□ 0.28
PCDHGA11Q9Y5H2 COX5A-204ENST00000567270 579 ntTSL 3 BASIC16.77■□□□□ 0.28
PCDHGA11Q9Y5H2 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC16.77■□□□□ 0.28
PCDHGA11Q9Y5H2 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC16.77■□□□□ 0.28
PCDHGA11Q9Y5H2 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
PCDHGA11Q9Y5H2 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC16.77■□□□□ 0.27
PCDHGA11Q9Y5H2 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
PCDHGA11Q9Y5H2 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC16.77■□□□□ 0.27
PCDHGA11Q9Y5H2 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
PCDHGA11Q9Y5H2 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
PCDHGA11Q9Y5H2 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
PCDHGA11Q9Y5H2 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
PCDHGA11Q9Y5H2 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC16.76■□□□□ 0.27
PCDHGA11Q9Y5H2 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
PCDHGA11Q9Y5H2 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
PCDHGA11Q9Y5H2 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC16.76■□□□□ 0.27
PCDHGA11Q9Y5H2 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 59.1 ms