Protein–RNA interactions for Protein: Q9Y5G1

PCDHGB3, Protocadherin gamma-B3, humanhuman

Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB3Q9Y5G1 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
PCDHGB3Q9Y5G1 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
PCDHGB3Q9Y5G1 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
PCDHGB3Q9Y5G1 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
PCDHGB3Q9Y5G1 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
PCDHGB3Q9Y5G1 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC16.42■□□□□ 0.22
PCDHGB3Q9Y5G1 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC16.42■□□□□ 0.22
PCDHGB3Q9Y5G1 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
PCDHGB3Q9Y5G1 AC106886.4-201ENST00000623557 2502 ntBASIC16.42■□□□□ 0.22
PCDHGB3Q9Y5G1 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
PCDHGB3Q9Y5G1 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
PCDHGB3Q9Y5G1 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
PCDHGB3Q9Y5G1 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
PCDHGB3Q9Y5G1 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC16.42■□□□□ 0.22
PCDHGB3Q9Y5G1 MYCLP1-201ENST00000372451 1075 ntBASIC16.42■□□□□ 0.22
PCDHGB3Q9Y5G1 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC16.42■□□□□ 0.22
PCDHGB3Q9Y5G1 AC246785.2-201ENST00000432512 513 ntBASIC16.42■□□□□ 0.22
PCDHGB3Q9Y5G1 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
PCDHGB3Q9Y5G1 AC002558.1-201ENST00000488906 803 ntBASIC16.42■□□□□ 0.22
PCDHGB3Q9Y5G1 SKP2-204ENST00000508514 821 ntTSL 3 BASIC16.42■□□□□ 0.22
PCDHGB3Q9Y5G1 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC16.42■□□□□ 0.22
PCDHGB3Q9Y5G1 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
PCDHGB3Q9Y5G1 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC16.42■□□□□ 0.22
PCDHGB3Q9Y5G1 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
PCDHGB3Q9Y5G1 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
PCDHGB3Q9Y5G1 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
PCDHGB3Q9Y5G1 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
PCDHGB3Q9Y5G1 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
PCDHGB3Q9Y5G1 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC16.42■□□□□ 0.22
PCDHGB3Q9Y5G1 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC16.42■□□□□ 0.22
PCDHGB3Q9Y5G1 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
PCDHGB3Q9Y5G1 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
PCDHGB3Q9Y5G1 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
PCDHGB3Q9Y5G1 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
PCDHGB3Q9Y5G1 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC16.42■□□□□ 0.22
PCDHGB3Q9Y5G1 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
PCDHGB3Q9Y5G1 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
PCDHGB3Q9Y5G1 AL513477.1-201ENST00000602865 2407 ntBASIC16.41■□□□□ 0.22
PCDHGB3Q9Y5G1 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
PCDHGB3Q9Y5G1 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
PCDHGB3Q9Y5G1 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
PCDHGB3Q9Y5G1 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC16.41■□□□□ 0.22
PCDHGB3Q9Y5G1 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
PCDHGB3Q9Y5G1 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
PCDHGB3Q9Y5G1 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
PCDHGB3Q9Y5G1 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
PCDHGB3Q9Y5G1 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
PCDHGB3Q9Y5G1 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
PCDHGB3Q9Y5G1 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
PCDHGB3Q9Y5G1 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC16.41■□□□□ 0.22
PCDHGB3Q9Y5G1 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
PCDHGB3Q9Y5G1 FAAHP1-202ENST00000446499 1238 ntBASIC16.41■□□□□ 0.22
PCDHGB3Q9Y5G1 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC16.41■□□□□ 0.22
PCDHGB3Q9Y5G1 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC16.41■□□□□ 0.22
PCDHGB3Q9Y5G1 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC16.41■□□□□ 0.22
PCDHGB3Q9Y5G1 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC16.41■□□□□ 0.22
PCDHGB3Q9Y5G1 Z69720.1-201ENST00000601483 472 ntBASIC16.41■□□□□ 0.22
PCDHGB3Q9Y5G1 AL353801.3-201ENST00000609898 542 ntBASIC16.41■□□□□ 0.22
PCDHGB3Q9Y5G1 AL121772.3-201ENST00000610840 674 ntBASIC16.41■□□□□ 0.22
PCDHGB3Q9Y5G1 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC16.41■□□□□ 0.22
PCDHGB3Q9Y5G1 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC16.41■□□□□ 0.22
PCDHGB3Q9Y5G1 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
PCDHGB3Q9Y5G1 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
PCDHGB3Q9Y5G1 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
PCDHGB3Q9Y5G1 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
PCDHGB3Q9Y5G1 PC-208ENST00000529047 1607 ntTSL 3 BASIC16.41■□□□□ 0.22
PCDHGB3Q9Y5G1 ADM-208ENST00000534464 1640 ntTSL 2 BASIC16.41■□□□□ 0.22
PCDHGB3Q9Y5G1 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
PCDHGB3Q9Y5G1 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
PCDHGB3Q9Y5G1 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
PCDHGB3Q9Y5G1 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
PCDHGB3Q9Y5G1 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC16.4■□□□□ 0.22
PCDHGB3Q9Y5G1 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
PCDHGB3Q9Y5G1 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC16.4■□□□□ 0.22
PCDHGB3Q9Y5G1 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
PCDHGB3Q9Y5G1 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
PCDHGB3Q9Y5G1 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
PCDHGB3Q9Y5G1 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
PCDHGB3Q9Y5G1 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
PCDHGB3Q9Y5G1 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
PCDHGB3Q9Y5G1 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC16.4■□□□□ 0.22
PCDHGB3Q9Y5G1 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
PCDHGB3Q9Y5G1 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
PCDHGB3Q9Y5G1 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC16.4■□□□□ 0.22
PCDHGB3Q9Y5G1 DANCR-204ENST00000444958 709 ntTSL 3 BASIC16.4■□□□□ 0.22
PCDHGB3Q9Y5G1 PON3-205ENST00000451904 1053 ntTSL 3 BASIC16.4■□□□□ 0.22
PCDHGB3Q9Y5G1 TOB2P1-201ENST00000469761 992 ntBASIC16.4■□□□□ 0.22
PCDHGB3Q9Y5G1 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC16.4■□□□□ 0.22
PCDHGB3Q9Y5G1 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC16.4■□□□□ 0.22
PCDHGB3Q9Y5G1 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
PCDHGB3Q9Y5G1 TBCB-205ENST00000585746 875 ntTSL 3 BASIC16.4■□□□□ 0.22
PCDHGB3Q9Y5G1 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC16.4■□□□□ 0.22
PCDHGB3Q9Y5G1 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
PCDHGB3Q9Y5G1 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC16.4■□□□□ 0.22
PCDHGB3Q9Y5G1 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC16.4■□□□□ 0.22
PCDHGB3Q9Y5G1 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
PCDHGB3Q9Y5G1 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC16.4■□□□□ 0.22
PCDHGB3Q9Y5G1 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC16.4■□□□□ 0.22
PCDHGB3Q9Y5G1 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
PCDHGB3Q9Y5G1 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC16.4■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 26.2 ms