Protein–RNA interactions for Protein: Q9NRR3

CDC42SE2, CDC42 small effector protein 2, humanhuman

Predictions only

Length 84 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2Q9NRR3 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
CDC42SE2Q9NRR3 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC11.92□□□□□ -0.5
CDC42SE2Q9NRR3 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
CDC42SE2Q9NRR3 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC11.92□□□□□ -0.5
CDC42SE2Q9NRR3 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
CDC42SE2Q9NRR3 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
CDC42SE2Q9NRR3 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
CDC42SE2Q9NRR3 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC11.92□□□□□ -0.5
CDC42SE2Q9NRR3 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC11.92□□□□□ -0.5
CDC42SE2Q9NRR3 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC11.91□□□□□ -0.5
CDC42SE2Q9NRR3 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC11.91□□□□□ -0.5
CDC42SE2Q9NRR3 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC11.91□□□□□ -0.5
CDC42SE2Q9NRR3 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
CDC42SE2Q9NRR3 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC11.91□□□□□ -0.5
CDC42SE2Q9NRR3 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC11.91□□□□□ -0.5
CDC42SE2Q9NRR3 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
CDC42SE2Q9NRR3 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC11.91□□□□□ -0.5
CDC42SE2Q9NRR3 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
CDC42SE2Q9NRR3 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
CDC42SE2Q9NRR3 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
CDC42SE2Q9NRR3 BAALC-202ENST00000306391 243 ntTSL 5 BASIC11.91□□□□□ -0.5
CDC42SE2Q9NRR3 BAALC-204ENST00000330955 222 ntTSL 5 BASIC11.91□□□□□ -0.5
CDC42SE2Q9NRR3 AC103564.2-201ENST00000432853 1299 ntBASIC11.91□□□□□ -0.5
CDC42SE2Q9NRR3 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
CDC42SE2Q9NRR3 AC122714.2-201ENST00000502787 707 ntBASIC11.91□□□□□ -0.5
CDC42SE2Q9NRR3 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC11.91□□□□□ -0.5
CDC42SE2Q9NRR3 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC11.91□□□□□ -0.5
CDC42SE2Q9NRR3 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
CDC42SE2Q9NRR3 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC11.91□□□□□ -0.5
CDC42SE2Q9NRR3 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC11.91□□□□□ -0.5
CDC42SE2Q9NRR3 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC11.91□□□□□ -0.5
CDC42SE2Q9NRR3 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
CDC42SE2Q9NRR3 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
CDC42SE2Q9NRR3 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
CDC42SE2Q9NRR3 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
CDC42SE2Q9NRR3 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
CDC42SE2Q9NRR3 EGFEM1P-202ENST00000431685 1563 ntBASIC11.91□□□□□ -0.5
CDC42SE2Q9NRR3 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
CDC42SE2Q9NRR3 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC11.91□□□□□ -0.5
CDC42SE2Q9NRR3 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
CDC42SE2Q9NRR3 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC11.91□□□□□ -0.5
CDC42SE2Q9NRR3 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
CDC42SE2Q9NRR3 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
CDC42SE2Q9NRR3 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
CDC42SE2Q9NRR3 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC11.91□□□□□ -0.5
CDC42SE2Q9NRR3 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC11.9□□□□□ -0.5
CDC42SE2Q9NRR3 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
CDC42SE2Q9NRR3 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC11.9□□□□□ -0.5
CDC42SE2Q9NRR3 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
CDC42SE2Q9NRR3 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC11.9□□□□□ -0.5
CDC42SE2Q9NRR3 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
CDC42SE2Q9NRR3 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC11.9□□□□□ -0.5
CDC42SE2Q9NRR3 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC11.9□□□□□ -0.5
CDC42SE2Q9NRR3 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
CDC42SE2Q9NRR3 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC11.9□□□□□ -0.5
CDC42SE2Q9NRR3 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
CDC42SE2Q9NRR3 Z83836.1-201ENST00000624605 1642 ntBASIC11.9□□□□□ -0.5
CDC42SE2Q9NRR3 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC11.9□□□□□ -0.5
CDC42SE2Q9NRR3 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
CDC42SE2Q9NRR3 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
CDC42SE2Q9NRR3 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC11.9□□□□□ -0.5
CDC42SE2Q9NRR3 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC11.9□□□□□ -0.5
CDC42SE2Q9NRR3 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
CDC42SE2Q9NRR3 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC11.9□□□□□ -0.5
CDC42SE2Q9NRR3 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC11.9□□□□□ -0.5
CDC42SE2Q9NRR3 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
CDC42SE2Q9NRR3 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
CDC42SE2Q9NRR3 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
CDC42SE2Q9NRR3 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
CDC42SE2Q9NRR3 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
CDC42SE2Q9NRR3 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC11.9□□□□□ -0.5
CDC42SE2Q9NRR3 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC11.9□□□□□ -0.5
CDC42SE2Q9NRR3 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC11.9□□□□□ -0.5
CDC42SE2Q9NRR3 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
CDC42SE2Q9NRR3 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
CDC42SE2Q9NRR3 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
CDC42SE2Q9NRR3 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
CDC42SE2Q9NRR3 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
CDC42SE2Q9NRR3 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC11.9□□□□□ -0.5
CDC42SE2Q9NRR3 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
CDC42SE2Q9NRR3 AL137013.1-201ENST00000432946 1228 ntBASIC11.9□□□□□ -0.5
CDC42SE2Q9NRR3 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
CDC42SE2Q9NRR3 HOMER2P1-201ENST00000455653 964 ntBASIC11.9□□□□□ -0.5
CDC42SE2Q9NRR3 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC11.9□□□□□ -0.5
CDC42SE2Q9NRR3 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC11.9□□□□□ -0.5
CDC42SE2Q9NRR3 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC11.9□□□□□ -0.5
CDC42SE2Q9NRR3 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
CDC42SE2Q9NRR3 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC11.9□□□□□ -0.5
CDC42SE2Q9NRR3 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
CDC42SE2Q9NRR3 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC11.9□□□□□ -0.5
CDC42SE2Q9NRR3 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC11.9□□□□□ -0.5
CDC42SE2Q9NRR3 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC11.9□□□□□ -0.5
CDC42SE2Q9NRR3 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC11.9□□□□□ -0.5
CDC42SE2Q9NRR3 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
CDC42SE2Q9NRR3 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
CDC42SE2Q9NRR3 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
CDC42SE2Q9NRR3 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC11.9□□□□□ -0.5
CDC42SE2Q9NRR3 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC11.9□□□□□ -0.5
CDC42SE2Q9NRR3 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC11.9□□□□□ -0.5
CDC42SE2Q9NRR3 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Retrieved 100 of 98,524 protein–RNA pairs in 34.5 ms