Protein–RNA interactions for Protein: Q99618

CDCA3, Cell division cycle-associated protein 3, humanhuman

Predicted RBP Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3Q99618 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CDCA3Q99618 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC17.79■□□□□ 0.44
CDCA3Q99618 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
CDCA3Q99618 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CDCA3Q99618 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CDCA3Q99618 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CDCA3Q99618 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CDCA3Q99618 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC17.79■□□□□ 0.44
CDCA3Q99618 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
CDCA3Q99618 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC17.79■□□□□ 0.44
CDCA3Q99618 EEF1D-207ENST00000524624 1084 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
CDCA3Q99618 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC17.79■□□□□ 0.44
CDCA3Q99618 NKG7-205ENST00000600427 520 ntTSL 3 BASIC17.79■□□□□ 0.44
CDCA3Q99618 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC17.79■□□□□ 0.44
CDCA3Q99618 WT1-AS_2.1-201ENST00000613208 137 ntBASIC17.79■□□□□ 0.44
CDCA3Q99618 DBI-211ENST00000627093 554 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CDCA3Q99618 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
CDCA3Q99618 HLA-DQB1-201ENST00000374943 1656 ntBASIC17.79■□□□□ 0.44
CDCA3Q99618 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CDCA3Q99618 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
CDCA3Q99618 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC17.79■□□□□ 0.44
CDCA3Q99618 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC17.79■□□□□ 0.44
CDCA3Q99618 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CDCA3Q99618 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CDCA3Q99618 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC17.78■□□□□ 0.44
CDCA3Q99618 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC17.78■□□□□ 0.44
CDCA3Q99618 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CDCA3Q99618 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
CDCA3Q99618 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CDCA3Q99618 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CDCA3Q99618 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CDCA3Q99618 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CDCA3Q99618 THOC7-201ENST00000295899 990 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CDCA3Q99618 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CDCA3Q99618 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CDCA3Q99618 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CDCA3Q99618 BLCAP-202ENST00000397131 633 ntAPPRIS P1 TSL 3 BASIC17.78■□□□□ 0.44
CDCA3Q99618 BLCAP-203ENST00000397134 566 ntAPPRIS P1 TSL 4 BASIC17.78■□□□□ 0.44
CDCA3Q99618 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC17.78■□□□□ 0.44
CDCA3Q99618 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC17.78■□□□□ 0.44
CDCA3Q99618 LY6E-204ENST00000519546 971 ntTSL 2 BASIC17.78■□□□□ 0.44
CDCA3Q99618 AC027369.6-201ENST00000525520 931 ntBASIC17.78■□□□□ 0.44
CDCA3Q99618 AL596325.1-201ENST00000563991 1082 ntBASIC17.78■□□□□ 0.44
CDCA3Q99618 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC17.78■□□□□ 0.44
CDCA3Q99618 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
CDCA3Q99618 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC17.78■□□□□ 0.44
CDCA3Q99618 AL008721.1-201ENST00000609964 604 ntBASIC17.78■□□□□ 0.44
CDCA3Q99618 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
CDCA3Q99618 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
CDCA3Q99618 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
CDCA3Q99618 AC100757.3-201ENST00000622361 1406 ntBASIC17.78■□□□□ 0.44
CDCA3Q99618 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC17.78■□□□□ 0.44
CDCA3Q99618 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC17.78■□□□□ 0.44
CDCA3Q99618 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
CDCA3Q99618 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CDCA3Q99618 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC17.78■□□□□ 0.44
CDCA3Q99618 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC17.78■□□□□ 0.44
CDCA3Q99618 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
CDCA3Q99618 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
CDCA3Q99618 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CDCA3Q99618 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC17.77■□□□□ 0.44
CDCA3Q99618 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC17.77■□□□□ 0.44
CDCA3Q99618 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC17.77■□□□□ 0.44
CDCA3Q99618 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC17.77■□□□□ 0.44
CDCA3Q99618 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC17.77■□□□□ 0.44
CDCA3Q99618 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
CDCA3Q99618 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CDCA3Q99618 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
CDCA3Q99618 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC17.77■□□□□ 0.44
CDCA3Q99618 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
CDCA3Q99618 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
CDCA3Q99618 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CDCA3Q99618 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
CDCA3Q99618 CALY-202ENST00000368555 783 ntTSL 2 BASIC17.77■□□□□ 0.44
CDCA3Q99618 ADIRF-201ENST00000372013 917 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CDCA3Q99618 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC17.77■□□□□ 0.44
CDCA3Q99618 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
CDCA3Q99618 MRPS18AP1-201ENST00000414458 589 ntBASIC17.77■□□□□ 0.44
CDCA3Q99618 PABPN1L-202ENST00000419291 1272 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CDCA3Q99618 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC17.77■□□□□ 0.44
CDCA3Q99618 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC17.77■□□□□ 0.44
CDCA3Q99618 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
CDCA3Q99618 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC17.77■□□□□ 0.44
CDCA3Q99618 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
CDCA3Q99618 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC17.77■□□□□ 0.44
CDCA3Q99618 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
CDCA3Q99618 AL590560.3-201ENST00000623350 461 ntBASIC17.77■□□□□ 0.44
CDCA3Q99618 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CDCA3Q99618 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CDCA3Q99618 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC17.77■□□□□ 0.44
CDCA3Q99618 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.43
CDCA3Q99618 TOP3BP1-201ENST00000420768 1380 ntBASIC17.77■□□□□ 0.43
CDCA3Q99618 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.43
CDCA3Q99618 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
CDCA3Q99618 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.43
CDCA3Q99618 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
CDCA3Q99618 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
CDCA3Q99618 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
CDCA3Q99618 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
CDCA3Q99618 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC17.76■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 62.8 ms