Protein–RNA interactions for Protein: Q96PV0

SYNGAP1, Ras/Rap GTPase-activating protein SynGAP, humanhuman

Predictions only

Length 1,343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1Q96PV0 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
SYNGAP1Q96PV0 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC19.57■□□□□ 0.72
SYNGAP1Q96PV0 NABP1-203ENST00000409510 843 ntTSL 5 BASIC19.57■□□□□ 0.72
SYNGAP1Q96PV0 TSEN15P1-201ENST00000423257 515 ntBASIC19.57■□□□□ 0.72
SYNGAP1Q96PV0 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC19.57■□□□□ 0.72
SYNGAP1Q96PV0 C5orf66-202ENST00000507641 547 ntTSL 3 BASIC19.57■□□□□ 0.72
SYNGAP1Q96PV0 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC19.57■□□□□ 0.72
SYNGAP1Q96PV0 CYB561-216ENST00000582297 897 ntTSL 3 BASIC19.57■□□□□ 0.72
SYNGAP1Q96PV0 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
SYNGAP1Q96PV0 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC19.57■□□□□ 0.72
SYNGAP1Q96PV0 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC19.57■□□□□ 0.72
SYNGAP1Q96PV0 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
SYNGAP1Q96PV0 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
SYNGAP1Q96PV0 PODN-203ENST00000395871 2744 ntTSL 5 BASIC19.57■□□□□ 0.72
SYNGAP1Q96PV0 GATB-213ENST00000515812 1893 ntTSL 5 BASIC19.57■□□□□ 0.72
SYNGAP1Q96PV0 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
SYNGAP1Q96PV0 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
SYNGAP1Q96PV0 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC19.57■□□□□ 0.72
SYNGAP1Q96PV0 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC19.57■□□□□ 0.72
SYNGAP1Q96PV0 AC090340.1-201ENST00000620778 4980 ntBASIC19.57■□□□□ 0.72
SYNGAP1Q96PV0 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC19.57■□□□□ 0.72
SYNGAP1Q96PV0 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC19.57■□□□□ 0.72
SYNGAP1Q96PV0 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
SYNGAP1Q96PV0 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
SYNGAP1Q96PV0 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC19.57■□□□□ 0.72
SYNGAP1Q96PV0 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
SYNGAP1Q96PV0 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
SYNGAP1Q96PV0 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC19.57■□□□□ 0.72
SYNGAP1Q96PV0 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
SYNGAP1Q96PV0 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC19.57■□□□□ 0.72
SYNGAP1Q96PV0 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
SYNGAP1Q96PV0 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC19.57■□□□□ 0.72
SYNGAP1Q96PV0 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
SYNGAP1Q96PV0 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
SYNGAP1Q96PV0 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC19.56■□□□□ 0.72
SYNGAP1Q96PV0 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC19.56■□□□□ 0.72
SYNGAP1Q96PV0 AMT-250ENST00000637682 1823 ntTSL 5 BASIC19.56■□□□□ 0.72
SYNGAP1Q96PV0 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
SYNGAP1Q96PV0 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC19.56■□□□□ 0.72
SYNGAP1Q96PV0 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC19.56■□□□□ 0.72
SYNGAP1Q96PV0 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC19.56■□□□□ 0.72
SYNGAP1Q96PV0 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
SYNGAP1Q96PV0 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC19.56■□□□□ 0.72
SYNGAP1Q96PV0 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
SYNGAP1Q96PV0 AC004835.2-201ENST00000603762 682 ntBASIC19.56■□□□□ 0.72
SYNGAP1Q96PV0 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
SYNGAP1Q96PV0 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC19.56■□□□□ 0.72
SYNGAP1Q96PV0 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
SYNGAP1Q96PV0 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
SYNGAP1Q96PV0 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
SYNGAP1Q96PV0 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
SYNGAP1Q96PV0 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
SYNGAP1Q96PV0 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
SYNGAP1Q96PV0 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
SYNGAP1Q96PV0 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
SYNGAP1Q96PV0 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
SYNGAP1Q96PV0 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
SYNGAP1Q96PV0 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
SYNGAP1Q96PV0 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
SYNGAP1Q96PV0 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
SYNGAP1Q96PV0 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
SYNGAP1Q96PV0 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC19.55■□□□□ 0.72
SYNGAP1Q96PV0 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC19.55■□□□□ 0.72
SYNGAP1Q96PV0 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC19.55■□□□□ 0.72
SYNGAP1Q96PV0 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC19.55■□□□□ 0.72
SYNGAP1Q96PV0 PAWRP1-201ENST00000451083 565 ntBASIC19.55■□□□□ 0.72
SYNGAP1Q96PV0 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC19.55■□□□□ 0.72
SYNGAP1Q96PV0 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC19.55■□□□□ 0.72
SYNGAP1Q96PV0 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC19.55■□□□□ 0.72
SYNGAP1Q96PV0 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC19.55■□□□□ 0.72
SYNGAP1Q96PV0 REXO1L3P-201ENST00000622202 1288 ntBASIC19.55■□□□□ 0.72
SYNGAP1Q96PV0 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC19.55■□□□□ 0.72
SYNGAP1Q96PV0 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC19.55■□□□□ 0.72
SYNGAP1Q96PV0 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
SYNGAP1Q96PV0 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
SYNGAP1Q96PV0 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
SYNGAP1Q96PV0 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
SYNGAP1Q96PV0 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC19.55■□□□□ 0.72
SYNGAP1Q96PV0 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
SYNGAP1Q96PV0 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC19.55■□□□□ 0.72
SYNGAP1Q96PV0 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
SYNGAP1Q96PV0 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC19.55■□□□□ 0.72
SYNGAP1Q96PV0 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
SYNGAP1Q96PV0 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC19.55■□□□□ 0.72
SYNGAP1Q96PV0 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
SYNGAP1Q96PV0 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC19.55■□□□□ 0.72
SYNGAP1Q96PV0 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC19.55■□□□□ 0.72
SYNGAP1Q96PV0 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC19.55■□□□□ 0.72
SYNGAP1Q96PV0 AC006116.8-202ENST00000587620 1550 ntBASIC19.54■□□□□ 0.72
SYNGAP1Q96PV0 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
SYNGAP1Q96PV0 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
SYNGAP1Q96PV0 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
SYNGAP1Q96PV0 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
SYNGAP1Q96PV0 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
SYNGAP1Q96PV0 AL139400.1-201ENST00000366220 510 ntBASIC19.54■□□□□ 0.72
SYNGAP1Q96PV0 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC19.54■□□□□ 0.72
SYNGAP1Q96PV0 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
SYNGAP1Q96PV0 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC19.54■□□□□ 0.72
SYNGAP1Q96PV0 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC19.54■□□□□ 0.72
SYNGAP1Q96PV0 ACTL9-202ENST00000612068 1252 ntBASIC19.54■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 38.3 ms