Protein–RNA interactions for Protein: Q8NDZ2

SIMC1, SUMO-interacting motif-containing protein 1, humanhuman

Predictions only

Length 872 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIMC1Q8NDZ2 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SIMC1Q8NDZ2 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SIMC1Q8NDZ2 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
SIMC1Q8NDZ2 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC16.31■□□□□ 0.2
SIMC1Q8NDZ2 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
SIMC1Q8NDZ2 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
SIMC1Q8NDZ2 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC16.31■□□□□ 0.2
SIMC1Q8NDZ2 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SIMC1Q8NDZ2 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC16.31■□□□□ 0.2
SIMC1Q8NDZ2 AC148477.5-201ENST00000625164 1645 ntBASIC16.31■□□□□ 0.2
SIMC1Q8NDZ2 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SIMC1Q8NDZ2 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SIMC1Q8NDZ2 PMPCAP1-201ENST00000508114 1576 ntBASIC16.31■□□□□ 0.2
SIMC1Q8NDZ2 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC16.31■□□□□ 0.2
SIMC1Q8NDZ2 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
SIMC1Q8NDZ2 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
SIMC1Q8NDZ2 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SIMC1Q8NDZ2 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
SIMC1Q8NDZ2 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
SIMC1Q8NDZ2 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC16.31■□□□□ 0.2
SIMC1Q8NDZ2 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC16.31■□□□□ 0.2
SIMC1Q8NDZ2 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
SIMC1Q8NDZ2 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SIMC1Q8NDZ2 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SIMC1Q8NDZ2 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
SIMC1Q8NDZ2 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SIMC1Q8NDZ2 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SIMC1Q8NDZ2 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
SIMC1Q8NDZ2 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SIMC1Q8NDZ2 CTNS-203ENST00000399306 803 ntTSL 3 BASIC16.31■□□□□ 0.2
SIMC1Q8NDZ2 LSM5-204ENST00000409909 740 ntTSL 2 BASIC16.31■□□□□ 0.2
SIMC1Q8NDZ2 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC16.31■□□□□ 0.2
SIMC1Q8NDZ2 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC16.31■□□□□ 0.2
SIMC1Q8NDZ2 UNC93B7-201ENST00000509439 705 ntBASIC16.31■□□□□ 0.2
SIMC1Q8NDZ2 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC16.31■□□□□ 0.2
SIMC1Q8NDZ2 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC16.31■□□□□ 0.2
SIMC1Q8NDZ2 STK25P1-201ENST00000585406 838 ntBASIC16.31■□□□□ 0.2
SIMC1Q8NDZ2 GZMM-202ENST00000592501 941 ntTSL 3 BASIC16.31■□□□□ 0.2
SIMC1Q8NDZ2 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
SIMC1Q8NDZ2 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
SIMC1Q8NDZ2 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SIMC1Q8NDZ2 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SIMC1Q8NDZ2 AC004817.3-201ENST00000602957 2129 ntBASIC16.31■□□□□ 0.2
SIMC1Q8NDZ2 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
SIMC1Q8NDZ2 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
SIMC1Q8NDZ2 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SIMC1Q8NDZ2 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
SIMC1Q8NDZ2 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
SIMC1Q8NDZ2 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
SIMC1Q8NDZ2 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SIMC1Q8NDZ2 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
SIMC1Q8NDZ2 NF2-208ENST00000403435 2568 ntTSL 5 BASIC16.31■□□□□ 0.2
SIMC1Q8NDZ2 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
SIMC1Q8NDZ2 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
SIMC1Q8NDZ2 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
SIMC1Q8NDZ2 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC16.3■□□□□ 0.2
SIMC1Q8NDZ2 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SIMC1Q8NDZ2 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC16.3■□□□□ 0.2
SIMC1Q8NDZ2 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
SIMC1Q8NDZ2 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SIMC1Q8NDZ2 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC16.3■□□□□ 0.2
SIMC1Q8NDZ2 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
SIMC1Q8NDZ2 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC16.3■□□□□ 0.2
SIMC1Q8NDZ2 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC16.3■□□□□ 0.2
SIMC1Q8NDZ2 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SIMC1Q8NDZ2 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
SIMC1Q8NDZ2 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
SIMC1Q8NDZ2 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
SIMC1Q8NDZ2 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC16.3■□□□□ 0.2
SIMC1Q8NDZ2 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SIMC1Q8NDZ2 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SIMC1Q8NDZ2 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
SIMC1Q8NDZ2 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
SIMC1Q8NDZ2 CD9-202ENST00000382515 1229 ntTSL 5 BASIC16.3■□□□□ 0.2
SIMC1Q8NDZ2 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
SIMC1Q8NDZ2 RBSN-204ENST00000449050 903 ntTSL 2 BASIC16.3■□□□□ 0.2
SIMC1Q8NDZ2 KRT16P4-201ENST00000453883 522 ntBASIC16.3■□□□□ 0.2
SIMC1Q8NDZ2 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC16.3■□□□□ 0.2
SIMC1Q8NDZ2 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SIMC1Q8NDZ2 IGHV3-52-201ENST00000519770 353 ntBASIC16.3■□□□□ 0.2
SIMC1Q8NDZ2 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC16.3■□□□□ 0.2
SIMC1Q8NDZ2 AC073592.5-201ENST00000624854 528 ntBASIC16.3■□□□□ 0.2
SIMC1Q8NDZ2 AP000867.4-201ENST00000641616 219 ntBASIC16.3■□□□□ 0.2
SIMC1Q8NDZ2 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SIMC1Q8NDZ2 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
SIMC1Q8NDZ2 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
SIMC1Q8NDZ2 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
SIMC1Q8NDZ2 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC16.3■□□□□ 0.2
SIMC1Q8NDZ2 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
SIMC1Q8NDZ2 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
SIMC1Q8NDZ2 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
SIMC1Q8NDZ2 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
SIMC1Q8NDZ2 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SIMC1Q8NDZ2 NKILA-202ENST00000614771 2598 ntBASIC16.3■□□□□ 0.2
SIMC1Q8NDZ2 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
SIMC1Q8NDZ2 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC16.29■□□□□ 0.2
SIMC1Q8NDZ2 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC16.29■□□□□ 0.2
SIMC1Q8NDZ2 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC16.29■□□□□ 0.2
SIMC1Q8NDZ2 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC16.29■□□□□ 0.2
SIMC1Q8NDZ2 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC16.29■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 51.3 ms