Protein–RNA interactions for Protein: Q7Z7G8

VPS13B, Vacuolar protein sorting-associated protein 13B, humanhuman

Predictions only

Length 4,022 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13BQ7Z7G8 AL158211.3-201ENST00000607385 239 ntBASIC10.54□□□□□ -0.72
VPS13BQ7Z7G8 VCX-203ENST00000620630 812 ntAPPRIS ALT2 TSL 5 BASIC10.54□□□□□ -0.72
VPS13BQ7Z7G8 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC10.54□□□□□ -0.72
VPS13BQ7Z7G8 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC10.54□□□□□ -0.72
VPS13BQ7Z7G8 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
VPS13BQ7Z7G8 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC10.54□□□□□ -0.72
VPS13BQ7Z7G8 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC10.54□□□□□ -0.72
VPS13BQ7Z7G8 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC10.53□□□□□ -0.72
VPS13BQ7Z7G8 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC10.53□□□□□ -0.72
VPS13BQ7Z7G8 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC10.53□□□□□ -0.72
VPS13BQ7Z7G8 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC10.53□□□□□ -0.72
VPS13BQ7Z7G8 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC10.53□□□□□ -0.72
VPS13BQ7Z7G8 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC10.53□□□□□ -0.72
VPS13BQ7Z7G8 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC10.53□□□□□ -0.72
VPS13BQ7Z7G8 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
VPS13BQ7Z7G8 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
VPS13BQ7Z7G8 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC10.53□□□□□ -0.72
VPS13BQ7Z7G8 MIR346-201ENST00000362234 95 ntBASIC10.53□□□□□ -0.72
VPS13BQ7Z7G8 AC140658.5-201ENST00000438532 169 ntBASIC10.53□□□□□ -0.72
VPS13BQ7Z7G8 RPS2P32-201ENST00000439199 892 ntBASIC10.53□□□□□ -0.72
VPS13BQ7Z7G8 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC10.53□□□□□ -0.72
VPS13BQ7Z7G8 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC10.53□□□□□ -0.72
VPS13BQ7Z7G8 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
VPS13BQ7Z7G8 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC10.53□□□□□ -0.72
VPS13BQ7Z7G8 AL390754.1-201ENST00000619088 582 ntBASIC10.53□□□□□ -0.72
VPS13BQ7Z7G8 FKBP4-208ENST00000630279 156 ntTSL 5 BASIC10.53□□□□□ -0.72
VPS13BQ7Z7G8 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC10.53□□□□□ -0.72
VPS13BQ7Z7G8 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
VPS13BQ7Z7G8 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC10.53□□□□□ -0.72
VPS13BQ7Z7G8 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
VPS13BQ7Z7G8 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
VPS13BQ7Z7G8 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
VPS13BQ7Z7G8 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
VPS13BQ7Z7G8 IGHV3-7-201ENST00000390598 430 ntAPPRIS P1 BASIC10.53□□□□□ -0.72
VPS13BQ7Z7G8 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC10.53□□□□□ -0.72
VPS13BQ7Z7G8 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
VPS13BQ7Z7G8 GATD1-206ENST00000526325 756 ntTSL 5 BASIC10.53□□□□□ -0.72
VPS13BQ7Z7G8 AC109635.5-201ENST00000533593 962 ntBASIC10.53□□□□□ -0.72
VPS13BQ7Z7G8 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
VPS13BQ7Z7G8 AC007613.1-201ENST00000572811 2597 ntBASIC10.53□□□□□ -0.72
VPS13BQ7Z7G8 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
VPS13BQ7Z7G8 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC10.53□□□□□ -0.72
VPS13BQ7Z7G8 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC10.53□□□□□ -0.72
VPS13BQ7Z7G8 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC10.53□□□□□ -0.72
VPS13BQ7Z7G8 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
VPS13BQ7Z7G8 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
VPS13BQ7Z7G8 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC10.53□□□□□ -0.72
VPS13BQ7Z7G8 AL645941.1-201ENST00000415875 338 ntTSL 3 BASIC10.53□□□□□ -0.72
VPS13BQ7Z7G8 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC10.53□□□□□ -0.72
VPS13BQ7Z7G8 AL031283.3-201ENST00000439788 727 ntTSL 3 BASIC10.53□□□□□ -0.72
VPS13BQ7Z7G8 FAM212B-207ENST00000534365 1217 ntTSL 5 BASIC10.53□□□□□ -0.72
VPS13BQ7Z7G8 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC10.53□□□□□ -0.72
VPS13BQ7Z7G8 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
VPS13BQ7Z7G8 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
VPS13BQ7Z7G8 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
VPS13BQ7Z7G8 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
VPS13BQ7Z7G8 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
VPS13BQ7Z7G8 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC10.52□□□□□ -0.72
VPS13BQ7Z7G8 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC10.52□□□□□ -0.72
VPS13BQ7Z7G8 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
VPS13BQ7Z7G8 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC10.52□□□□□ -0.72
VPS13BQ7Z7G8 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC10.52□□□□□ -0.72
VPS13BQ7Z7G8 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC10.52□□□□□ -0.72
VPS13BQ7Z7G8 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC10.52□□□□□ -0.72
VPS13BQ7Z7G8 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC10.52□□□□□ -0.72
VPS13BQ7Z7G8 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC10.52□□□□□ -0.72
VPS13BQ7Z7G8 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC10.52□□□□□ -0.72
VPS13BQ7Z7G8 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC10.52□□□□□ -0.72
VPS13BQ7Z7G8 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC10.52□□□□□ -0.72
VPS13BQ7Z7G8 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC10.52□□□□□ -0.72
VPS13BQ7Z7G8 DCTD-213ENST00000510370 794 ntAPPRIS P1 TSL 5 BASIC10.52□□□□□ -0.72
VPS13BQ7Z7G8 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC10.52□□□□□ -0.72
VPS13BQ7Z7G8 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC10.52□□□□□ -0.72
VPS13BQ7Z7G8 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC10.52□□□□□ -0.72
VPS13BQ7Z7G8 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
VPS13BQ7Z7G8 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
VPS13BQ7Z7G8 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC10.52□□□□□ -0.73
VPS13BQ7Z7G8 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC10.52□□□□□ -0.73
VPS13BQ7Z7G8 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
VPS13BQ7Z7G8 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
VPS13BQ7Z7G8 RBPMS2P1-201ENST00000437762 623 ntBASIC10.52□□□□□ -0.73
VPS13BQ7Z7G8 POLE2-203ENST00000553805 496 ntTSL 2 BASIC10.52□□□□□ -0.73
VPS13BQ7Z7G8 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC10.52□□□□□ -0.73
VPS13BQ7Z7G8 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC10.52□□□□□ -0.73
VPS13BQ7Z7G8 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC10.52□□□□□ -0.73
VPS13BQ7Z7G8 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
VPS13BQ7Z7G8 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
VPS13BQ7Z7G8 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
VPS13BQ7Z7G8 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
VPS13BQ7Z7G8 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC10.52□□□□□ -0.73
VPS13BQ7Z7G8 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC10.52□□□□□ -0.73
VPS13BQ7Z7G8 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
VPS13BQ7Z7G8 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
VPS13BQ7Z7G8 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC10.52□□□□□ -0.73
VPS13BQ7Z7G8 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
VPS13BQ7Z7G8 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC10.52□□□□□ -0.73
VPS13BQ7Z7G8 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
VPS13BQ7Z7G8 TSSK5P-201ENST00000423978 907 ntBASIC10.52□□□□□ -0.73
VPS13BQ7Z7G8 MACROD2-AS1-202ENST00000455291 663 ntTSL 2 BASIC10.52□□□□□ -0.73
VPS13BQ7Z7G8 NUTM2A-AS1-212ENST00000458739 733 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Retrieved 100 of 98,524 protein–RNA pairs in 32 ms