Protein–RNA interactions for Protein: Q5VTL8

PRPF38B, Pre-mRNA-splicing factor 38B, humanhuman

Known RBP Predictions only

Length 546 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38BQ5VTL8 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC18.55■□□□□ 0.56
PRPF38BQ5VTL8 ZNF564-202ENST00000416136 255 ntTSL 3 BASIC18.55■□□□□ 0.56
PRPF38BQ5VTL8 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC18.55■□□□□ 0.56
PRPF38BQ5VTL8 AL121983.1-201ENST00000424181 335 ntTSL 2 BASIC18.55■□□□□ 0.56
PRPF38BQ5VTL8 RASL12-203ENST00000434605 982 ntTSL 2 BASIC18.55■□□□□ 0.56
PRPF38BQ5VTL8 ZNF707-203ENST00000442058 562 ntTSL 4 BASIC18.55■□□□□ 0.56
PRPF38BQ5VTL8 AC087163.2-201ENST00000457299 853 ntBASIC18.55■□□□□ 0.56
PRPF38BQ5VTL8 ZNF890P-202ENST00000530367 1156 ntBASIC18.55■□□□□ 0.56
PRPF38BQ5VTL8 C2orf69P2-201ENST00000562032 1123 ntBASIC18.55■□□□□ 0.56
PRPF38BQ5VTL8 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC18.55■□□□□ 0.56
PRPF38BQ5VTL8 MIR5572-201ENST00000583188 137 ntBASIC18.55■□□□□ 0.56
PRPF38BQ5VTL8 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC18.55■□□□□ 0.56
PRPF38BQ5VTL8 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC18.55■□□□□ 0.56
PRPF38BQ5VTL8 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
PRPF38BQ5VTL8 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC18.55■□□□□ 0.56
PRPF38BQ5VTL8 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
PRPF38BQ5VTL8 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC18.55■□□□□ 0.56
PRPF38BQ5VTL8 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
PRPF38BQ5VTL8 CETN4P-206ENST00000642099 2168 ntBASIC18.55■□□□□ 0.56
PRPF38BQ5VTL8 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC18.55■□□□□ 0.56
PRPF38BQ5VTL8 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
PRPF38BQ5VTL8 ME2-218ENST00000640965 2476 ntTSL 5 BASIC18.55■□□□□ 0.56
PRPF38BQ5VTL8 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC18.54■□□□□ 0.56
PRPF38BQ5VTL8 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
PRPF38BQ5VTL8 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
PRPF38BQ5VTL8 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
PRPF38BQ5VTL8 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
PRPF38BQ5VTL8 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC18.54■□□□□ 0.56
PRPF38BQ5VTL8 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
PRPF38BQ5VTL8 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
PRPF38BQ5VTL8 SNCG-201ENST00000348795 684 ntTSL 2 BASIC18.54■□□□□ 0.56
PRPF38BQ5VTL8 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
PRPF38BQ5VTL8 KIF9-205ENST00000432493 633 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
PRPF38BQ5VTL8 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
PRPF38BQ5VTL8 FO681548.1-201ENST00000455617 1132 ntBASIC18.54■□□□□ 0.56
PRPF38BQ5VTL8 SELENOW-201ENST00000509570 881 ntTSL 5 BASIC18.54■□□□□ 0.56
PRPF38BQ5VTL8 AC136475.5-202ENST00000524824 587 ntTSL 4 BASIC18.54■□□□□ 0.56
PRPF38BQ5VTL8 CMTM3-212ENST00000566121 572 ntTSL 3 BASIC18.54■□□□□ 0.56
PRPF38BQ5VTL8 DBNDD1-206ENST00000568838 993 ntTSL 2 BASIC18.54■□□□□ 0.56
PRPF38BQ5VTL8 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
PRPF38BQ5VTL8 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC18.54■□□□□ 0.56
PRPF38BQ5VTL8 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC18.54■□□□□ 0.56
PRPF38BQ5VTL8 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
PRPF38BQ5VTL8 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC18.54■□□□□ 0.56
PRPF38BQ5VTL8 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
PRPF38BQ5VTL8 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
PRPF38BQ5VTL8 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
PRPF38BQ5VTL8 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
PRPF38BQ5VTL8 PDIA3P1-201ENST00000471856 1510 ntBASIC18.54■□□□□ 0.56
PRPF38BQ5VTL8 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC18.54■□□□□ 0.56
PRPF38BQ5VTL8 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC18.53■□□□□ 0.56
PRPF38BQ5VTL8 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
PRPF38BQ5VTL8 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
PRPF38BQ5VTL8 ECSIT-209ENST00000591104 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
PRPF38BQ5VTL8 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
PRPF38BQ5VTL8 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC18.53■□□□□ 0.56
PRPF38BQ5VTL8 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
PRPF38BQ5VTL8 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC18.53■□□□□ 0.56
PRPF38BQ5VTL8 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
PRPF38BQ5VTL8 C3orf22-201ENST00000318225 1000 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
PRPF38BQ5VTL8 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
PRPF38BQ5VTL8 SPAG11A-203ENST00000351436 534 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
PRPF38BQ5VTL8 SPAG11B-204ENST00000361111 534 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
PRPF38BQ5VTL8 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
PRPF38BQ5VTL8 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
PRPF38BQ5VTL8 AC104457.1-201ENST00000401024 814 ntBASIC18.53■□□□□ 0.56
PRPF38BQ5VTL8 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC18.53■□□□□ 0.56
PRPF38BQ5VTL8 ACTG1P4-201ENST00000425123 1122 ntBASIC18.53■□□□□ 0.56
PRPF38BQ5VTL8 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
PRPF38BQ5VTL8 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
PRPF38BQ5VTL8 GEMIN4-202ENST00000437269 1182 ntTSL 2 BASIC18.53■□□□□ 0.56
PRPF38BQ5VTL8 AL121845.2-201ENST00000467211 252 ntAPPRIS P1 TSL 3 BASIC18.53■□□□□ 0.56
PRPF38BQ5VTL8 IL32-215ENST00000529550 772 ntAPPRIS P4 TSL 3 BASIC18.53■□□□□ 0.56
PRPF38BQ5VTL8 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC18.53■□□□□ 0.56
PRPF38BQ5VTL8 RORA-AS1-205ENST00000559824 761 ntTSL 3 BASIC18.53■□□□□ 0.56
PRPF38BQ5VTL8 AC109462.3-201ENST00000573934 613 ntBASIC18.53■□□□□ 0.56
PRPF38BQ5VTL8 AC004790.1-201ENST00000612686 536 ntBASIC18.53■□□□□ 0.56
PRPF38BQ5VTL8 AC099795.1-202ENST00000640492 759 ntTSL 5 BASIC18.53■□□□□ 0.56
PRPF38BQ5VTL8 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
PRPF38BQ5VTL8 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC18.53■□□□□ 0.56
PRPF38BQ5VTL8 STX6-204ENST00000542060 4809 ntTSL 2 BASIC18.53■□□□□ 0.56
PRPF38BQ5VTL8 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC18.53■□□□□ 0.56
PRPF38BQ5VTL8 AL512408.1-201ENST00000569378 2000 ntBASIC18.52■□□□□ 0.56
PRPF38BQ5VTL8 TEX264-205ENST00000416589 1313 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
PRPF38BQ5VTL8 AIRN-201ENST00000601203 4374 ntBASIC18.52■□□□□ 0.56
PRPF38BQ5VTL8 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
PRPF38BQ5VTL8 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
PRPF38BQ5VTL8 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC18.52■□□□□ 0.56
PRPF38BQ5VTL8 C1orf123-201ENST00000294360 1085 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
PRPF38BQ5VTL8 SMIM29-202ENST00000394990 792 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
PRPF38BQ5VTL8 ARL16-201ENST00000397498 1227 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
PRPF38BQ5VTL8 HMGA1P7-201ENST00000406908 502 ntBASIC18.52■□□□□ 0.56
PRPF38BQ5VTL8 AC006033.1-201ENST00000440505 426 ntBASIC18.52■□□□□ 0.56
PRPF38BQ5VTL8 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
PRPF38BQ5VTL8 CSF2RBP1-201ENST00000447905 391 ntBASIC18.52■□□□□ 0.56
PRPF38BQ5VTL8 BX324167.1-201ENST00000451118 805 ntTSL 5 BASIC18.52■□□□□ 0.56
PRPF38BQ5VTL8 AC091390.4-201ENST00000484974 491 ntTSL 3 BASIC18.52■□□□□ 0.56
PRPF38BQ5VTL8 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC18.52■□□□□ 0.56
PRPF38BQ5VTL8 Metazoa_SRP.80-201ENST00000619894 320 ntBASIC18.52■□□□□ 0.56
PRPF38BQ5VTL8 ARL16-214ENST00000621051 1181 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 62 ms