Protein–RNA interactions for Protein: P54277

PMS1, PMS1 protein homolog 1, humanhuman

Known RBP Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1P54277 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC19■□□□□ 0.63
PMS1P54277 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
PMS1P54277 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
PMS1P54277 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC19■□□□□ 0.63
PMS1P54277 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC19■□□□□ 0.63
PMS1P54277 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
PMS1P54277 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
PMS1P54277 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC19■□□□□ 0.63
PMS1P54277 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
PMS1P54277 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC19■□□□□ 0.63
PMS1P54277 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
PMS1P54277 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC19■□□□□ 0.63
PMS1P54277 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
PMS1P54277 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC19■□□□□ 0.63
PMS1P54277 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
PMS1P54277 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC19■□□□□ 0.63
PMS1P54277 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC19■□□□□ 0.63
PMS1P54277 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
PMS1P54277 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
PMS1P54277 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC19■□□□□ 0.63
PMS1P54277 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC19■□□□□ 0.63
PMS1P54277 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
PMS1P54277 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC19■□□□□ 0.63
PMS1P54277 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
PMS1P54277 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC18.99■□□□□ 0.63
PMS1P54277 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
PMS1P54277 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC18.99■□□□□ 0.63
PMS1P54277 OS9-205ENST00000413095 1660 ntTSL 2 BASIC18.99■□□□□ 0.63
PMS1P54277 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
PMS1P54277 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC18.99■□□□□ 0.63
PMS1P54277 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC18.99■□□□□ 0.63
PMS1P54277 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
PMS1P54277 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
PMS1P54277 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
PMS1P54277 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC18.99■□□□□ 0.63
PMS1P54277 SPDYE21P-201ENST00000413323 827 ntBASIC18.99■□□□□ 0.63
PMS1P54277 POM121L3P-201ENST00000419331 1163 ntBASIC18.99■□□□□ 0.63
PMS1P54277 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC18.99■□□□□ 0.63
PMS1P54277 RNF146-204ENST00000476956 884 ntTSL 2 BASIC18.99■□□□□ 0.63
PMS1P54277 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
PMS1P54277 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC18.99■□□□□ 0.63
PMS1P54277 MIR5100-201ENST00000579544 119 ntBASIC18.99■□□□□ 0.63
PMS1P54277 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC18.99■□□□□ 0.63
PMS1P54277 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC18.99■□□□□ 0.63
PMS1P54277 AC091076.1-201ENST00000610741 619 ntBASIC18.99■□□□□ 0.63
PMS1P54277 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC18.99■□□□□ 0.63
PMS1P54277 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
PMS1P54277 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
PMS1P54277 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
PMS1P54277 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC18.99■□□□□ 0.63
PMS1P54277 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
PMS1P54277 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC18.99■□□□□ 0.63
PMS1P54277 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
PMS1P54277 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
PMS1P54277 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
PMS1P54277 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
PMS1P54277 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
PMS1P54277 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
PMS1P54277 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
PMS1P54277 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC18.99■□□□□ 0.63
PMS1P54277 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
PMS1P54277 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC18.98■□□□□ 0.63
PMS1P54277 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
PMS1P54277 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC18.98■□□□□ 0.63
PMS1P54277 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
PMS1P54277 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
PMS1P54277 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
PMS1P54277 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
PMS1P54277 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
PMS1P54277 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC18.98■□□□□ 0.63
PMS1P54277 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
PMS1P54277 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
PMS1P54277 MED16-201ENST00000269814 1199 ntTSL 5 BASIC18.98■□□□□ 0.63
PMS1P54277 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
PMS1P54277 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC18.98■□□□□ 0.63
PMS1P54277 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC18.98■□□□□ 0.63
PMS1P54277 NUS1P2-201ENST00000417358 873 ntBASIC18.98■□□□□ 0.63
PMS1P54277 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
PMS1P54277 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC18.98■□□□□ 0.63
PMS1P54277 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC18.98■□□□□ 0.63
PMS1P54277 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC18.98■□□□□ 0.63
PMS1P54277 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
PMS1P54277 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
PMS1P54277 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
PMS1P54277 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC18.98■□□□□ 0.63
PMS1P54277 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
PMS1P54277 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
PMS1P54277 PCDHB19P-201ENST00000570871 2371 ntBASIC18.98■□□□□ 0.63
PMS1P54277 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC18.98■□□□□ 0.63
PMS1P54277 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
PMS1P54277 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC18.98■□□□□ 0.63
PMS1P54277 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
PMS1P54277 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC18.98■□□□□ 0.63
PMS1P54277 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC18.97■□□□□ 0.63
PMS1P54277 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC18.97■□□□□ 0.63
PMS1P54277 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC18.97■□□□□ 0.63
PMS1P54277 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
PMS1P54277 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
PMS1P54277 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
PMS1P54277 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC18.97■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 68.8 ms