Protein–RNA interactions for Protein: P16619

CCL3L1, C-C motif chemokine 3-like 1, humanhuman

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL3L1P16619 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
CCL3L1P16619 TPM4P1-201ENST00000436100 807 ntBASIC14.27□□□□□ -0.13
CCL3L1P16619 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC14.27□□□□□ -0.13
CCL3L1P16619 FAM197Y8-203ENST00000450145 560 ntBASIC14.27□□□□□ -0.13
CCL3L1P16619 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC14.27□□□□□ -0.13
CCL3L1P16619 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
CCL3L1P16619 AC073648.2-201ENST00000510116 352 ntBASIC14.27□□□□□ -0.13
CCL3L1P16619 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC14.27□□□□□ -0.13
CCL3L1P16619 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC14.27□□□□□ -0.13
CCL3L1P16619 AC064862.7-201ENST00000604520 867 ntBASIC14.27□□□□□ -0.13
CCL3L1P16619 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
CCL3L1P16619 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC14.27□□□□□ -0.13
CCL3L1P16619 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
CCL3L1P16619 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
CCL3L1P16619 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC14.27□□□□□ -0.13
CCL3L1P16619 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
CCL3L1P16619 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
CCL3L1P16619 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
CCL3L1P16619 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC14.27□□□□□ -0.13
CCL3L1P16619 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
CCL3L1P16619 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
CCL3L1P16619 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
CCL3L1P16619 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC14.27□□□□□ -0.13
CCL3L1P16619 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
CCL3L1P16619 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC14.27□□□□□ -0.13
CCL3L1P16619 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
CCL3L1P16619 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CCL3L1P16619 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
CCL3L1P16619 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CCL3L1P16619 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC14.26□□□□□ -0.13
CCL3L1P16619 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC14.26□□□□□ -0.13
CCL3L1P16619 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC14.26□□□□□ -0.13
CCL3L1P16619 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
CCL3L1P16619 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
CCL3L1P16619 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
CCL3L1P16619 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
CCL3L1P16619 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
CCL3L1P16619 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
CCL3L1P16619 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
CCL3L1P16619 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CCL3L1P16619 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CCL3L1P16619 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CCL3L1P16619 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
CCL3L1P16619 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
CCL3L1P16619 RAB17-203ENST00000409576 466 ntTSL 3 BASIC14.26□□□□□ -0.13
CCL3L1P16619 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC14.26□□□□□ -0.13
CCL3L1P16619 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC14.26□□□□□ -0.13
CCL3L1P16619 MSRA-206ENST00000521209 814 ntTSL 3 BASIC14.26□□□□□ -0.13
CCL3L1P16619 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC14.26□□□□□ -0.13
CCL3L1P16619 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC14.26□□□□□ -0.13
CCL3L1P16619 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC14.26□□□□□ -0.13
CCL3L1P16619 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC14.26□□□□□ -0.13
CCL3L1P16619 AC025062.2-201ENST00000605477 670 ntBASIC14.26□□□□□ -0.13
CCL3L1P16619 LTB4R2-202ENST00000528054 3092 ntBASIC14.26□□□□□ -0.13
CCL3L1P16619 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
CCL3L1P16619 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
CCL3L1P16619 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
CCL3L1P16619 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
CCL3L1P16619 AC093525.9-201ENST00000624961 1746 ntBASIC14.26□□□□□ -0.13
CCL3L1P16619 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC14.26□□□□□ -0.13
CCL3L1P16619 AC116353.5-201ENST00000638148 1699 ntBASIC14.26□□□□□ -0.13
CCL3L1P16619 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
CCL3L1P16619 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC14.26□□□□□ -0.13
CCL3L1P16619 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CCL3L1P16619 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
CCL3L1P16619 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CCL3L1P16619 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
CCL3L1P16619 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC14.25□□□□□ -0.13
CCL3L1P16619 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CCL3L1P16619 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC14.25□□□□□ -0.13
CCL3L1P16619 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
CCL3L1P16619 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC14.25□□□□□ -0.13
CCL3L1P16619 GID4-202ENST00000376345 1391 ntTSL 3 BASIC14.25□□□□□ -0.13
CCL3L1P16619 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
CCL3L1P16619 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
CCL3L1P16619 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC14.25□□□□□ -0.13
CCL3L1P16619 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CCL3L1P16619 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
CCL3L1P16619 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CCL3L1P16619 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CCL3L1P16619 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CCL3L1P16619 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC14.25□□□□□ -0.13
CCL3L1P16619 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
CCL3L1P16619 LINC00982-205ENST00000420957 435 ntBASIC14.25□□□□□ -0.13
CCL3L1P16619 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC14.25□□□□□ -0.13
CCL3L1P16619 RPS2P1-201ENST00000434010 821 ntBASIC14.25□□□□□ -0.13
CCL3L1P16619 PRYP5-201ENST00000451909 266 ntBASIC14.25□□□□□ -0.13
CCL3L1P16619 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC14.25□□□□□ -0.13
CCL3L1P16619 RNPS1P1-201ENST00000507437 918 ntBASIC14.25□□□□□ -0.13
CCL3L1P16619 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC14.25□□□□□ -0.13
CCL3L1P16619 MOK-208ENST00000519058 917 ntTSL 2 BASIC14.25□□□□□ -0.13
CCL3L1P16619 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC14.25□□□□□ -0.13
CCL3L1P16619 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC14.25□□□□□ -0.13
CCL3L1P16619 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC14.25□□□□□ -0.13
CCL3L1P16619 PNMT-203ENST00000581428 677 ntTSL 2 BASIC14.25□□□□□ -0.13
CCL3L1P16619 SDCCAG3P1-201ENST00000589292 1150 ntBASIC14.25□□□□□ -0.13
CCL3L1P16619 CALM3-211ENST00000598871 561 ntTSL 4 BASIC14.25□□□□□ -0.13
CCL3L1P16619 AC104692.2-201ENST00000603054 253 ntBASIC14.25□□□□□ -0.13
CCL3L1P16619 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
CCL3L1P16619 VPS51-217ENST00000639871 243 ntTSL 5 BASIC14.25□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 26.6 ms