Protein–RNA interactions for Protein: P02538

KRT6A, Keratin, type II cytoskeletal 6A, humanhuman

Predictions only

Length 564 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT6AP02538 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
KRT6AP02538 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC16.77■□□□□ 0.28
KRT6AP02538 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
KRT6AP02538 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
KRT6AP02538 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
KRT6AP02538 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
KRT6AP02538 SLC25A1P3-201ENST00000395415 828 ntBASIC16.77■□□□□ 0.28
KRT6AP02538 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC16.77■□□□□ 0.28
KRT6AP02538 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
KRT6AP02538 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC16.77■□□□□ 0.28
KRT6AP02538 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC16.77■□□□□ 0.28
KRT6AP02538 FAM86EP-206ENST00000510506 987 ntBASIC16.77■□□□□ 0.28
KRT6AP02538 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC16.77■□□□□ 0.28
KRT6AP02538 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC16.77■□□□□ 0.28
KRT6AP02538 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
KRT6AP02538 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC16.77■□□□□ 0.28
KRT6AP02538 AL353593.2-201ENST00000602529 1483 ntBASIC16.77■□□□□ 0.28
KRT6AP02538 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC16.77■□□□□ 0.28
KRT6AP02538 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
KRT6AP02538 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC16.77■□□□□ 0.27
KRT6AP02538 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC16.77■□□□□ 0.27
KRT6AP02538 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
KRT6AP02538 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC16.77■□□□□ 0.27
KRT6AP02538 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC16.77■□□□□ 0.27
KRT6AP02538 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC16.76■□□□□ 0.27
KRT6AP02538 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
KRT6AP02538 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
KRT6AP02538 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
KRT6AP02538 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
KRT6AP02538 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
KRT6AP02538 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
KRT6AP02538 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
KRT6AP02538 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
KRT6AP02538 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC16.76■□□□□ 0.27
KRT6AP02538 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC16.76■□□□□ 0.27
KRT6AP02538 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC16.76■□□□□ 0.27
KRT6AP02538 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
KRT6AP02538 AC011467.2-201ENST00000598425 242 ntBASIC16.76■□□□□ 0.27
KRT6AP02538 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC16.76■□□□□ 0.27
KRT6AP02538 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
KRT6AP02538 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
KRT6AP02538 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
KRT6AP02538 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
KRT6AP02538 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
KRT6AP02538 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC16.76■□□□□ 0.27
KRT6AP02538 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
KRT6AP02538 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
KRT6AP02538 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
KRT6AP02538 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
KRT6AP02538 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
KRT6AP02538 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
KRT6AP02538 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
KRT6AP02538 KRT18P1-202ENST00000452408 1331 ntBASIC16.75■□□□□ 0.27
KRT6AP02538 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
KRT6AP02538 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
KRT6AP02538 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
KRT6AP02538 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
KRT6AP02538 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
KRT6AP02538 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
KRT6AP02538 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC16.75■□□□□ 0.27
KRT6AP02538 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
KRT6AP02538 CCS-201ENST00000310190 942 ntTSL 5 BASIC16.75■□□□□ 0.27
KRT6AP02538 AC003669.1-201ENST00000334569 611 ntBASIC16.75■□□□□ 0.27
KRT6AP02538 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
KRT6AP02538 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
KRT6AP02538 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
KRT6AP02538 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC16.75■□□□□ 0.27
KRT6AP02538 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
KRT6AP02538 TSSC2-201ENST00000450217 709 ntBASIC16.75■□□□□ 0.27
KRT6AP02538 STK19B-204ENST00000512515 211 ntBASIC16.75■□□□□ 0.27
KRT6AP02538 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC16.75■□□□□ 0.27
KRT6AP02538 Z69720.1-201ENST00000601483 472 ntBASIC16.75■□□□□ 0.27
KRT6AP02538 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC16.75■□□□□ 0.27
KRT6AP02538 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
KRT6AP02538 AC116407.4-201ENST00000623319 1061 ntBASIC16.75■□□□□ 0.27
KRT6AP02538 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC16.75■□□□□ 0.27
KRT6AP02538 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
KRT6AP02538 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
KRT6AP02538 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
KRT6AP02538 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
KRT6AP02538 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
KRT6AP02538 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
KRT6AP02538 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
KRT6AP02538 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
KRT6AP02538 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
KRT6AP02538 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC16.75■□□□□ 0.27
KRT6AP02538 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
KRT6AP02538 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC16.75■□□□□ 0.27
KRT6AP02538 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
KRT6AP02538 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
KRT6AP02538 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
KRT6AP02538 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
KRT6AP02538 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
KRT6AP02538 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC16.74■□□□□ 0.27
KRT6AP02538 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
KRT6AP02538 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC16.74■□□□□ 0.27
KRT6AP02538 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC16.74■□□□□ 0.27
KRT6AP02538 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
KRT6AP02538 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
KRT6AP02538 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 34.2 ms