Protein–RNA interactions for Protein: O15353

FOXN1, Forkhead box protein N1, humanhuman

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN1O15353 VMA21-202ENST00000370361 693 ntTSL 5 BASIC20.58■□□□□ 0.89
FOXN1O15353 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC20.58■□□□□ 0.89
FOXN1O15353 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.89
FOXN1O15353 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
FOXN1O15353 AC126696.2-201ENST00000563687 522 ntTSL 3 BASIC20.58■□□□□ 0.89
FOXN1O15353 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
FOXN1O15353 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
FOXN1O15353 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
FOXN1O15353 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
FOXN1O15353 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
FOXN1O15353 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC20.58■□□□□ 0.88
FOXN1O15353 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.88
FOXN1O15353 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
FOXN1O15353 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
FOXN1O15353 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
FOXN1O15353 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.88
FOXN1O15353 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
FOXN1O15353 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC20.58■□□□□ 0.88
FOXN1O15353 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.88
FOXN1O15353 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
FOXN1O15353 BSG-215ENST00000618006 1329 ntTSL 2 BASIC20.57■□□□□ 0.88
FOXN1O15353 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
FOXN1O15353 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC20.57■□□□□ 0.88
FOXN1O15353 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
FOXN1O15353 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
FOXN1O15353 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
FOXN1O15353 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
FOXN1O15353 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
FOXN1O15353 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC20.57■□□□□ 0.88
FOXN1O15353 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
FOXN1O15353 AL357497.1-201ENST00000436249 666 ntTSL 3 BASIC20.57■□□□□ 0.88
FOXN1O15353 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC20.57■□□□□ 0.88
FOXN1O15353 GPR53P-205ENST00000457298 1084 ntBASIC20.57■□□□□ 0.88
FOXN1O15353 ARTN-206ENST00000472435 402 ntTSL 3 BASIC20.57■□□□□ 0.88
FOXN1O15353 EEF1D-207ENST00000524624 1084 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
FOXN1O15353 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC20.57■□□□□ 0.88
FOXN1O15353 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC20.57■□□□□ 0.88
FOXN1O15353 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC20.57■□□□□ 0.88
FOXN1O15353 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
FOXN1O15353 AC116407.2-201ENST00000613639 860 ntBASIC20.57■□□□□ 0.88
FOXN1O15353 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC20.57■□□□□ 0.88
FOXN1O15353 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
FOXN1O15353 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC20.57■□□□□ 0.88
FOXN1O15353 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC20.57■□□□□ 0.88
FOXN1O15353 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
FOXN1O15353 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
FOXN1O15353 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
FOXN1O15353 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
FOXN1O15353 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
FOXN1O15353 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
FOXN1O15353 AC009102.3-201ENST00000623118 1491 ntBASIC20.56■□□□□ 0.88
FOXN1O15353 STK4-201ENST00000372801 2038 ntTSL 2 BASIC20.56■□□□□ 0.88
FOXN1O15353 TUBB3P1-201ENST00000405796 1332 ntBASIC20.56■□□□□ 0.88
FOXN1O15353 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC20.56■□□□□ 0.88
FOXN1O15353 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC20.56■□□□□ 0.88
FOXN1O15353 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC20.56■□□□□ 0.88
FOXN1O15353 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC20.56■□□□□ 0.88
FOXN1O15353 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
FOXN1O15353 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
FOXN1O15353 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
FOXN1O15353 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
FOXN1O15353 AIRN-201ENST00000601203 4374 ntBASIC20.56■□□□□ 0.88
FOXN1O15353 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC20.56■□□□□ 0.88
FOXN1O15353 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC20.56■□□□□ 0.88
FOXN1O15353 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
FOXN1O15353 KRT17P7-201ENST00000451704 1104 ntBASIC20.56■□□□□ 0.88
FOXN1O15353 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC20.56■□□□□ 0.88
FOXN1O15353 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC20.56■□□□□ 0.88
FOXN1O15353 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC20.56■□□□□ 0.88
FOXN1O15353 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC20.56■□□□□ 0.88
FOXN1O15353 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
FOXN1O15353 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
FOXN1O15353 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC20.56■□□□□ 0.88
FOXN1O15353 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
FOXN1O15353 FO538757.1-201ENST00000623083 1397 ntBASIC20.56■□□□□ 0.88
FOXN1O15353 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC20.56■□□□□ 0.88
FOXN1O15353 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
FOXN1O15353 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
FOXN1O15353 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
FOXN1O15353 REM2-202ENST00000536884 1331 ntTSL 2 BASIC20.55■□□□□ 0.88
FOXN1O15353 LTB4R2-202ENST00000528054 3092 ntBASIC20.55■□□□□ 0.88
FOXN1O15353 EML3-212ENST00000494176 2901 ntTSL 2 BASIC20.55■□□□□ 0.88
FOXN1O15353 EML3-216ENST00000529309 2909 ntTSL 2 BASIC20.55■□□□□ 0.88
FOXN1O15353 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
FOXN1O15353 SIGLEC16-201ENST00000599858 1437 ntBASIC20.55■□□□□ 0.88
FOXN1O15353 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC20.55■□□□□ 0.88
FOXN1O15353 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC20.55■□□□□ 0.88
FOXN1O15353 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
FOXN1O15353 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
FOXN1O15353 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
FOXN1O15353 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
FOXN1O15353 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
FOXN1O15353 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
FOXN1O15353 MIR149-201ENST00000384879 89 ntBASIC20.55■□□□□ 0.88
FOXN1O15353 AL645941.1-201ENST00000415875 338 ntTSL 3 BASIC20.55■□□□□ 0.88
FOXN1O15353 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC20.55■□□□□ 0.88
FOXN1O15353 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC20.55■□□□□ 0.88
FOXN1O15353 KLF2P3-201ENST00000451977 1087 ntBASIC20.55■□□□□ 0.88
FOXN1O15353 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC20.55■□□□□ 0.88
FOXN1O15353 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC20.55■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 66.2 ms