Protein–RNA interactions for Protein: A6NJU9

NPIPB13, Nuclear pore complex-interacting protein family member B13, humanhuman

Predictions only

Length 1,138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB13A6NJU9 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
NPIPB13A6NJU9 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
NPIPB13A6NJU9 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
NPIPB13A6NJU9 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
NPIPB13A6NJU9 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
NPIPB13A6NJU9 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
NPIPB13A6NJU9 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC15.26■□□□□ 0.03
NPIPB13A6NJU9 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC15.26■□□□□ 0.03
NPIPB13A6NJU9 AC091304.2-201ENST00000564639 760 ntBASIC15.26■□□□□ 0.03
NPIPB13A6NJU9 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC15.26■□□□□ 0.03
NPIPB13A6NJU9 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC15.26■□□□□ 0.03
NPIPB13A6NJU9 PRR29-207ENST00000580752 458 ntTSL 3 BASIC15.26■□□□□ 0.03
NPIPB13A6NJU9 NKAPP1-205ENST00000585790 367 ntBASIC15.26■□□□□ 0.03
NPIPB13A6NJU9 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
NPIPB13A6NJU9 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC15.26■□□□□ 0.03
NPIPB13A6NJU9 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC15.26■□□□□ 0.03
NPIPB13A6NJU9 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
NPIPB13A6NJU9 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC15.26■□□□□ 0.03
NPIPB13A6NJU9 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
NPIPB13A6NJU9 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
NPIPB13A6NJU9 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
NPIPB13A6NJU9 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
NPIPB13A6NJU9 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
NPIPB13A6NJU9 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
NPIPB13A6NJU9 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
NPIPB13A6NJU9 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
NPIPB13A6NJU9 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
NPIPB13A6NJU9 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
NPIPB13A6NJU9 AL021920.2-201ENST00000624828 1351 ntBASIC15.25■□□□□ 0.03
NPIPB13A6NJU9 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
NPIPB13A6NJU9 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
NPIPB13A6NJU9 AC011676.5-201ENST00000624864 2660 ntBASIC15.25■□□□□ 0.03
NPIPB13A6NJU9 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
NPIPB13A6NJU9 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
NPIPB13A6NJU9 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
NPIPB13A6NJU9 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
NPIPB13A6NJU9 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
NPIPB13A6NJU9 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
NPIPB13A6NJU9 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
NPIPB13A6NJU9 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC15.25■□□□□ 0.03
NPIPB13A6NJU9 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC15.25■□□□□ 0.03
NPIPB13A6NJU9 FGFR3P6-201ENST00000457012 610 ntBASIC15.25■□□□□ 0.03
NPIPB13A6NJU9 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
NPIPB13A6NJU9 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC15.25■□□□□ 0.03
NPIPB13A6NJU9 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC15.25■□□□□ 0.03
NPIPB13A6NJU9 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC15.25■□□□□ 0.03
NPIPB13A6NJU9 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
NPIPB13A6NJU9 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC15.25■□□□□ 0.03
NPIPB13A6NJU9 AL139424.1-201ENST00000607572 797 ntBASIC15.25■□□□□ 0.03
NPIPB13A6NJU9 AL732292.2-201ENST00000609649 430 ntBASIC15.25■□□□□ 0.03
NPIPB13A6NJU9 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC15.25■□□□□ 0.03
NPIPB13A6NJU9 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
NPIPB13A6NJU9 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC15.25■□□□□ 0.03
NPIPB13A6NJU9 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
NPIPB13A6NJU9 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
NPIPB13A6NJU9 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC15.25■□□□□ 0.03
NPIPB13A6NJU9 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
NPIPB13A6NJU9 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
NPIPB13A6NJU9 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
NPIPB13A6NJU9 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
NPIPB13A6NJU9 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC15.25■□□□□ 0.03
NPIPB13A6NJU9 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
NPIPB13A6NJU9 HNRNPRP1-201ENST00000453465 1695 ntBASIC15.25■□□□□ 0.03
NPIPB13A6NJU9 AGGF1P2-201ENST00000426656 2106 ntBASIC15.25■□□□□ 0.03
NPIPB13A6NJU9 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
NPIPB13A6NJU9 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
NPIPB13A6NJU9 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
NPIPB13A6NJU9 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
NPIPB13A6NJU9 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
NPIPB13A6NJU9 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
NPIPB13A6NJU9 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC15.24■□□□□ 0.03
NPIPB13A6NJU9 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
NPIPB13A6NJU9 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
NPIPB13A6NJU9 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC15.24■□□□□ 0.03
NPIPB13A6NJU9 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
NPIPB13A6NJU9 FZD10-202ENST00000539839 3282 ntBASIC15.24■□□□□ 0.03
NPIPB13A6NJU9 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
NPIPB13A6NJU9 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC15.24■□□□□ 0.03
NPIPB13A6NJU9 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC15.24■□□□□ 0.03
NPIPB13A6NJU9 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
NPIPB13A6NJU9 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
NPIPB13A6NJU9 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
NPIPB13A6NJU9 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
NPIPB13A6NJU9 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC15.24■□□□□ 0.03
NPIPB13A6NJU9 SCARNA2-201ENST00000458748 420 ntBASIC15.24■□□□□ 0.03
NPIPB13A6NJU9 BX005266.1-201ENST00000473402 457 ntBASIC15.24■□□□□ 0.03
NPIPB13A6NJU9 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC15.24■□□□□ 0.03
NPIPB13A6NJU9 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC15.24■□□□□ 0.03
NPIPB13A6NJU9 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC15.24■□□□□ 0.03
NPIPB13A6NJU9 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC15.24■□□□□ 0.03
NPIPB13A6NJU9 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
NPIPB13A6NJU9 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC15.24■□□□□ 0.03
NPIPB13A6NJU9 PRELID1P1-202ENST00000567272 903 ntBASIC15.24■□□□□ 0.03
NPIPB13A6NJU9 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC15.24■□□□□ 0.03
NPIPB13A6NJU9 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
NPIPB13A6NJU9 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC15.24■□□□□ 0.03
NPIPB13A6NJU9 MTDHP3-201ENST00000594186 672 ntBASIC15.24■□□□□ 0.03
NPIPB13A6NJU9 TERC-201ENST00000602385 541 ntBASIC15.24■□□□□ 0.03
NPIPB13A6NJU9 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
NPIPB13A6NJU9 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 39.7 ms