Protein–RNA interactions for Protein: Q709C8

VPS13C, Vacuolar protein sorting-associated protein 13C, humanhuman

Predictions only

Length 3,753 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13CQ709C8 MIR346-201ENST00000362234 95 ntBASIC14.26□□□□□ -0.13
VPS13CQ709C8 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
VPS13CQ709C8 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC14.26□□□□□ -0.13
VPS13CQ709C8 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
VPS13CQ709C8 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
VPS13CQ709C8 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC14.26□□□□□ -0.13
VPS13CQ709C8 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
VPS13CQ709C8 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
VPS13CQ709C8 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
VPS13CQ709C8 AGTRAP-202ENST00000376627 1055 ntTSL 5 BASIC14.26□□□□□ -0.13
VPS13CQ709C8 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
VPS13CQ709C8 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC14.26□□□□□ -0.13
VPS13CQ709C8 RARRES2P8-201ENST00000566335 367 ntBASIC14.26□□□□□ -0.13
VPS13CQ709C8 AL157392.3-207ENST00000601758 744 ntTSL 5 BASIC14.26□□□□□ -0.13
VPS13CQ709C8 VCX-203ENST00000620630 812 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
VPS13CQ709C8 EIF6-209ENST00000621148 1054 ntAPPRIS P1 TSL 3 BASIC14.26□□□□□ -0.13
VPS13CQ709C8 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
VPS13CQ709C8 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC14.26□□□□□ -0.13
VPS13CQ709C8 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC14.26□□□□□ -0.13
VPS13CQ709C8 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
VPS13CQ709C8 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
VPS13CQ709C8 AL355312.1-201ENST00000407115 2176 ntBASIC14.25□□□□□ -0.13
VPS13CQ709C8 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
VPS13CQ709C8 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
VPS13CQ709C8 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC14.25□□□□□ -0.13
VPS13CQ709C8 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
VPS13CQ709C8 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC14.25□□□□□ -0.13
VPS13CQ709C8 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC14.25□□□□□ -0.13
VPS13CQ709C8 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC14.25□□□□□ -0.13
VPS13CQ709C8 UXT-AS1-201ENST00000590504 1525 ntBASIC14.25□□□□□ -0.13
VPS13CQ709C8 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
VPS13CQ709C8 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC14.25□□□□□ -0.13
VPS13CQ709C8 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC14.25□□□□□ -0.13
VPS13CQ709C8 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
VPS13CQ709C8 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC14.25□□□□□ -0.13
VPS13CQ709C8 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
VPS13CQ709C8 RBPMS2P1-201ENST00000437762 623 ntBASIC14.25□□□□□ -0.13
VPS13CQ709C8 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC14.25□□□□□ -0.13
VPS13CQ709C8 MACROD2-AS1-202ENST00000455291 663 ntTSL 2 BASIC14.25□□□□□ -0.13
VPS13CQ709C8 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC14.25□□□□□ -0.13
VPS13CQ709C8 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
VPS13CQ709C8 ELOF1-208ENST00000591912 899 ntTSL 5 BASIC14.25□□□□□ -0.13
VPS13CQ709C8 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
VPS13CQ709C8 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC14.25□□□□□ -0.13
VPS13CQ709C8 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC14.25□□□□□ -0.13
VPS13CQ709C8 POR-209ENST00000439269 1858 ntTSL 2 BASIC14.25□□□□□ -0.13
VPS13CQ709C8 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
VPS13CQ709C8 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC14.25□□□□□ -0.13
VPS13CQ709C8 ENDOV-201ENST00000323854 1226 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
VPS13CQ709C8 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC14.25□□□□□ -0.13
VPS13CQ709C8 AL645941.1-201ENST00000415875 338 ntTSL 3 BASIC14.25□□□□□ -0.13
VPS13CQ709C8 DUTP2-201ENST00000519164 463 ntBASIC14.25□□□□□ -0.13
VPS13CQ709C8 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC14.25□□□□□ -0.13
VPS13CQ709C8 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
VPS13CQ709C8 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
VPS13CQ709C8 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
VPS13CQ709C8 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
VPS13CQ709C8 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC14.24□□□□□ -0.13
VPS13CQ709C8 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC14.24□□□□□ -0.13
VPS13CQ709C8 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
VPS13CQ709C8 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
VPS13CQ709C8 BX276092.7-203ENST00000637198 1536 ntBASIC14.24□□□□□ -0.13
VPS13CQ709C8 ATP6V0B-201ENST00000236067 944 ntTSL 2 BASIC14.24□□□□□ -0.13
VPS13CQ709C8 IGHV3-7-201ENST00000390598 430 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
VPS13CQ709C8 ATP6V0B-211ENST00000498664 825 ntTSL 2 BASIC14.24□□□□□ -0.13
VPS13CQ709C8 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
VPS13CQ709C8 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
VPS13CQ709C8 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC14.24□□□□□ -0.13
VPS13CQ709C8 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
VPS13CQ709C8 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC14.24□□□□□ -0.13
VPS13CQ709C8 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
VPS13CQ709C8 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
VPS13CQ709C8 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
VPS13CQ709C8 ITPR1-AS1-201ENST00000412804 858 ntTSL 2 BASIC14.24□□□□□ -0.13
VPS13CQ709C8 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC14.24□□□□□ -0.13
VPS13CQ709C8 AC004233.1-201ENST00000570515 608 ntTSL 4 BASIC14.24□□□□□ -0.13
VPS13CQ709C8 MRPS23-202ENST00000578444 580 ntTSL 2 BASIC14.24□□□□□ -0.13
VPS13CQ709C8 MIR6805-201ENST00000615055 62 ntBASIC14.24□□□□□ -0.13
VPS13CQ709C8 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC14.24□□□□□ -0.13
VPS13CQ709C8 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
VPS13CQ709C8 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC14.24□□□□□ -0.13
VPS13CQ709C8 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC14.24□□□□□ -0.13
VPS13CQ709C8 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
VPS13CQ709C8 PGF-202ENST00000405431 666 ntTSL 5 BASIC14.24□□□□□ -0.13
VPS13CQ709C8 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC14.24□□□□□ -0.13
VPS13CQ709C8 TGFA-205ENST00000444975 985 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
VPS13CQ709C8 AC026150.2-201ENST00000564693 1156 ntBASIC14.24□□□□□ -0.13
VPS13CQ709C8 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC14.24□□□□□ -0.13
VPS13CQ709C8 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC14.24□□□□□ -0.13
VPS13CQ709C8 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
VPS13CQ709C8 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC14.24□□□□□ -0.13
VPS13CQ709C8 RABEPK-201ENST00000259460 1313 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
VPS13CQ709C8 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC14.23□□□□□ -0.13
VPS13CQ709C8 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
VPS13CQ709C8 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC14.23□□□□□ -0.13
VPS13CQ709C8 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
VPS13CQ709C8 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC14.23□□□□□ -0.13
VPS13CQ709C8 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
VPS13CQ709C8 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
VPS13CQ709C8 ACTG1P4-201ENST00000425123 1122 ntBASIC14.23□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms