Protein–RNA interactions for Protein: Q61216

Mre11, Double-strand break repair protein MRE11, mousemouse

Predictions only

Length 706 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mre11Q61216 Src-202ENSMUST00000092576 3887 ntTSL 5 BASIC17.19■□□□□ 0.34
Mre11Q61216 Tmem51os1-203ENSMUST00000150202 1667 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Mre11Q61216 Map6-205ENSMUST00000207883 3431 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
Mre11Q61216 Col1a1-201ENSMUST00000001547 5930 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Mre11Q61216 Rsbn1l-201ENSMUST00000036489 5550 ntAPPRIS P2 TSL 5 BASIC17.19■□□□□ 0.34
Mre11Q61216 P2rx3-201ENSMUST00000028465 1812 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Mre11Q61216 Naa30-201ENSMUST00000037362 4464 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
Mre11Q61216 Igf2-201ENSMUST00000000033 3708 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Mre11Q61216 Pik3cd-214ENSMUST00000177654 4765 ntAPPRIS P4 TSL 5 BASIC17.19■□□□□ 0.34
Mre11Q61216 Grk6-203ENSMUST00000224118 1997 ntAPPRIS ALT2 BASIC17.19■□□□□ 0.34
Mre11Q61216 Mau2-201ENSMUST00000050561 5369 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
Mre11Q61216 Sirt4-202ENSMUST00000112067 1645 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Mre11Q61216 Rnase10-201ENSMUST00000022424 1629 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
Mre11Q61216 Lhpp-201ENSMUST00000033241 1612 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Mre11Q61216 Ncaph-201ENSMUST00000110387 2695 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Mre11Q61216 Hoxd3-202ENSMUST00000111982 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Mre11Q61216 Gm14812-201ENSMUST00000156494 1794 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Mre11Q61216 Crat-202ENSMUST00000102854 2160 ntTSL 5 BASIC17.18■□□□□ 0.34
Mre11Q61216 Kcnip1-202ENSMUST00000101368 2322 ntTSL 2 BASIC17.18■□□□□ 0.34
Mre11Q61216 Nek6-203ENSMUST00000112902 3147 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Mre11Q61216 Apln-201ENSMUST00000039026 3149 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Mre11Q61216 C5ar1-201ENSMUST00000050770 2481 ntAPPRIS P1 TSL 3 BASIC17.18■□□□□ 0.34
Mre11Q61216 Adgrb2-202ENSMUST00000097868 4635 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
Mre11Q61216 Cldn7-203ENSMUST00000108596 664 ntTSL 3 BASIC17.18■□□□□ 0.34
Mre11Q61216 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Mre11Q61216 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
Mre11Q61216 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Mre11Q61216 Prdm5-203ENSMUST00000081219 984 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Mre11Q61216 Gm9754-201ENSMUST00000031305 3004 ntTSL 2 BASIC17.18■□□□□ 0.34
Mre11Q61216 Gdf10-201ENSMUST00000168727 5210 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Mre11Q61216 Gm26546-201ENSMUST00000181000 4276 ntTSL 5 BASIC17.18■□□□□ 0.34
Mre11Q61216 Gm5422-202ENSMUST00000216161 2928 ntTSL 5 BASIC17.18■□□□□ 0.34
Mre11Q61216 Gm26593-201ENSMUST00000181848 1970 ntTSL 5 BASIC17.18■□□□□ 0.34
Mre11Q61216 Gm39377-201ENSMUST00000214587 2533 ntTSL 5 BASIC17.18■□□□□ 0.34
Mre11Q61216 Emilin2-201ENSMUST00000024849 3910 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Mre11Q61216 Gm6159-201ENSMUST00000191249 1724 ntBASIC17.18■□□□□ 0.34
Mre11Q61216 Ube3a-201ENSMUST00000107537 4911 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Mre11Q61216 Ush1c-207ENSMUST00000176371 1865 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
Mre11Q61216 A530013C23Rik-201ENSMUST00000130679 2555 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Mre11Q61216 Aspg-201ENSMUST00000079400 2722 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Mre11Q61216 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Mre11Q61216 Ntf3-201ENSMUST00000050484 1483 ntAPPRIS P3 TSL 2 BASIC17.18■□□□□ 0.34
Mre11Q61216 Nfic-202ENSMUST00000078185 3163 ntTSL 5 BASIC17.18■□□□□ 0.34
Mre11Q61216 Nphp4-202ENSMUST00000081393 5027 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Mre11Q61216 Camta2-203ENSMUST00000108544 4632 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Mre11Q61216 Plekhb1-207ENSMUST00000116287 1911 ntAPPRIS ALT1 TSL 3 BASIC17.17■□□□□ 0.34
Mre11Q61216 Mir17hg-201ENSMUST00000134140 3536 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Mre11Q61216 Gtf3c5-201ENSMUST00000028157 2739 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
Mre11Q61216 Map3k20-201ENSMUST00000090824 3334 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
Mre11Q61216 Casz1-202ENSMUST00000122222 7926 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
Mre11Q61216 Sntb2-203ENSMUST00000212524 9945 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Mre11Q61216 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
Mre11Q61216 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Mre11Q61216 Gm12480-201ENSMUST00000129576 774 ntTSL 3 BASIC17.17■□□□□ 0.34
Mre11Q61216 Ythdf2-203ENSMUST00000152796 4129 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Mre11Q61216 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Mre11Q61216 Gm20498-202ENSMUST00000164386 1043 ntTSL 2 BASIC17.17■□□□□ 0.34
Mre11Q61216 Gm9924-202ENSMUST00000192760 2311 ntBASIC17.17■□□□□ 0.34
Mre11Q61216 Ighv6-1-201ENSMUST00000193612 343 ntBASIC17.17■□□□□ 0.34
Mre11Q61216 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Mre11Q61216 CT009738.1-201ENSMUST00000219031 809 ntBASIC17.17■□□□□ 0.34
Mre11Q61216 Gm7002-201ENSMUST00000221386 2165 ntBASIC17.17■□□□□ 0.34
Mre11Q61216 Pcsk5-201ENSMUST00000025618 6675 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
Mre11Q61216 Rit1-201ENSMUST00000029692 1204 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Mre11Q61216 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Mre11Q61216 Col1a2-201ENSMUST00000031668 5348 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Mre11Q61216 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Mre11Q61216 Arhgap20-201ENSMUST00000065496 7161 ntAPPRIS P2 TSL 5 BASIC17.17■□□□□ 0.34
Mre11Q61216 Chfr-201ENSMUST00000014812 3146 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
Mre11Q61216 Lrig2-205ENSMUST00000198332 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Mre11Q61216 Gm29253-201ENSMUST00000185727 5231 ntTSL 5 BASIC17.17■□□□□ 0.34
Mre11Q61216 Hps3-202ENSMUST00000108321 3385 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Mre11Q61216 Tmem251-201ENSMUST00000057416 3367 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Mre11Q61216 Kcnk13-201ENSMUST00000049788 3078 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Mre11Q61216 Traf1-202ENSMUST00000113064 2325 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Mre11Q61216 Kbtbd6-202ENSMUST00000226192 2984 ntAPPRIS P2 BASIC17.16■□□□□ 0.34
Mre11Q61216 Cggbp1-201ENSMUST00000067744 4425 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Mre11Q61216 Ephb1-202ENSMUST00000085169 4101 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Mre11Q61216 Per1-201ENSMUST00000021271 4671 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Mre11Q61216 Hsd3b7-203ENSMUST00000106272 1725 ntTSL 5 BASIC17.16■□□□□ 0.34
Mre11Q61216 Gpr4-201ENSMUST00000060225 2882 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Mre11Q61216 Sptb-201ENSMUST00000021458 10394 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Mre11Q61216 Otx2-209ENSMUST00000226501 2592 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
Mre11Q61216 Zfp583-201ENSMUST00000062765 2550 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Mre11Q61216 Chp1-201ENSMUST00000014221 2609 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Mre11Q61216 Gm13464-201ENSMUST00000119418 935 ntBASIC17.16■□□□□ 0.34
Mre11Q61216 AA414768-201ENSMUST00000121924 1257 ntBASIC17.16■□□□□ 0.34
Mre11Q61216 Gm6345-202ENSMUST00000180900 204 ntBASIC17.16■□□□□ 0.34
Mre11Q61216 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Mre11Q61216 CT010506.4-201ENSMUST00000225457 351 ntBASIC17.16■□□□□ 0.34
Mre11Q61216 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC17.16■□□□□ 0.34
Mre11Q61216 Tcf3-205ENSMUST00000105341 2451 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
Mre11Q61216 Zyx-202ENSMUST00000164375 3188 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
Mre11Q61216 Cdx4-201ENSMUST00000033689 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Mre11Q61216 Gns-201ENSMUST00000040344 3855 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Mre11Q61216 Atat1-202ENSMUST00000061052 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Mre11Q61216 B3gnt8-201ENSMUST00000076034 1463 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Mre11Q61216 Asb3-206ENSMUST00000203878 1813 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
Mre11Q61216 Ebf1-202ENSMUST00000101326 3422 ntAPPRIS ALT1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Mre11Q61216 Col26a1-201ENSMUST00000057497 2724 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 32.3 ms