Protein–RNA interactions for Protein: P51160

PDE6C, Cone cGMP-specific 3',5'-cyclic phosphodiesterase subunit alpha', humanhuman

Predictions only

Length 858 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6CP51160 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC18.72■□□□□ 0.59
PDE6CP51160 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
PDE6CP51160 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
PDE6CP51160 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
PDE6CP51160 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
PDE6CP51160 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC18.72■□□□□ 0.59
PDE6CP51160 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
PDE6CP51160 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC18.71■□□□□ 0.59
PDE6CP51160 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
PDE6CP51160 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
PDE6CP51160 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
PDE6CP51160 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC18.71■□□□□ 0.59
PDE6CP51160 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC18.71■□□□□ 0.59
PDE6CP51160 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
PDE6CP51160 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
PDE6CP51160 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
PDE6CP51160 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
PDE6CP51160 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
PDE6CP51160 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
PDE6CP51160 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
PDE6CP51160 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC18.71■□□□□ 0.59
PDE6CP51160 RBM17P3-201ENST00000417687 1192 ntBASIC18.71■□□□□ 0.59
PDE6CP51160 AC009078.2-202ENST00000463353 338 ntBASIC18.71■□□□□ 0.59
PDE6CP51160 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC18.71■□□□□ 0.59
PDE6CP51160 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC18.71■□□□□ 0.59
PDE6CP51160 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
PDE6CP51160 GZMM-202ENST00000592501 941 ntTSL 3 BASIC18.71■□□□□ 0.59
PDE6CP51160 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
PDE6CP51160 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
PDE6CP51160 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
PDE6CP51160 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC18.71■□□□□ 0.59
PDE6CP51160 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC18.71■□□□□ 0.59
PDE6CP51160 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC18.71■□□□□ 0.59
PDE6CP51160 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC18.71■□□□□ 0.59
PDE6CP51160 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC18.71■□□□□ 0.59
PDE6CP51160 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
PDE6CP51160 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
PDE6CP51160 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
PDE6CP51160 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
PDE6CP51160 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC18.7■□□□□ 0.58
PDE6CP51160 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
PDE6CP51160 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC18.7■□□□□ 0.58
PDE6CP51160 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
PDE6CP51160 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC18.7■□□□□ 0.58
PDE6CP51160 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC18.7■□□□□ 0.58
PDE6CP51160 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
PDE6CP51160 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
PDE6CP51160 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
PDE6CP51160 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
PDE6CP51160 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
PDE6CP51160 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
PDE6CP51160 RCN1P2-201ENST00000398357 915 ntBASIC18.7■□□□□ 0.58
PDE6CP51160 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC18.7■□□□□ 0.58
PDE6CP51160 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
PDE6CP51160 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC18.7■□□□□ 0.58
PDE6CP51160 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
PDE6CP51160 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
PDE6CP51160 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC18.7■□□□□ 0.58
PDE6CP51160 AC011467.2-201ENST00000598425 242 ntBASIC18.7■□□□□ 0.58
PDE6CP51160 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC18.7■□□□□ 0.58
PDE6CP51160 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
PDE6CP51160 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
PDE6CP51160 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
PDE6CP51160 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC18.7■□□□□ 0.58
PDE6CP51160 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
PDE6CP51160 AC084018.2-201ENST00000613093 2607 ntBASIC18.7■□□□□ 0.58
PDE6CP51160 OR6D1P-203ENST00000641209 4860 ntBASIC18.69■□□□□ 0.58
PDE6CP51160 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
PDE6CP51160 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
PDE6CP51160 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
PDE6CP51160 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
PDE6CP51160 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
PDE6CP51160 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC18.69■□□□□ 0.58
PDE6CP51160 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PDE6CP51160 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
PDE6CP51160 AC080080.1-201ENST00000625121 2420 ntBASIC18.69■□□□□ 0.58
PDE6CP51160 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
PDE6CP51160 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
PDE6CP51160 PENK-208ENST00000523051 772 ntTSL 5 BASIC18.69■□□□□ 0.58
PDE6CP51160 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC18.69■□□□□ 0.58
PDE6CP51160 AF238378.1-201ENST00000526806 358 ntBASIC18.69■□□□□ 0.58
PDE6CP51160 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC18.69■□□□□ 0.58
PDE6CP51160 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC18.69■□□□□ 0.58
PDE6CP51160 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC18.69■□□□□ 0.58
PDE6CP51160 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC18.69■□□□□ 0.58
PDE6CP51160 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
PDE6CP51160 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PDE6CP51160 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PDE6CP51160 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PDE6CP51160 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
PDE6CP51160 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
PDE6CP51160 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC18.69■□□□□ 0.58
PDE6CP51160 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
PDE6CP51160 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC18.69■□□□□ 0.58
PDE6CP51160 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
PDE6CP51160 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PDE6CP51160 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
PDE6CP51160 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
PDE6CP51160 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PDE6CP51160 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC18.68■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 35.5 ms