Protein–RNA interactions for Protein: P29279

CTGF, Connective tissue growth factor, humanhuman

Predictions only

Length 349 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTGFP29279 AC020915.1-202ENST00000427361 922 ntAPPRIS ALT2 TSL 2 BASIC19.27■□□□□ 0.68
CTGFP29279 MACROD2-AS1-201ENST00000439451 1230 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
CTGFP29279 SATB1-217ENST00000493952 626 ntTSL 3 BASIC19.27■□□□□ 0.68
CTGFP29279 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC19.27■□□□□ 0.68
CTGFP29279 AC079336.1-201ENST00000583156 420 ntTSL 3 BASIC19.27■□□□□ 0.68
CTGFP29279 AL031055.1-201ENST00000606362 631 ntBASIC19.27■□□□□ 0.68
CTGFP29279 AC018529.1-201ENST00000613063 361 ntBASIC19.27■□□□□ 0.68
CTGFP29279 IFI27-210ENST00000616764 716 ntAPPRIS P2 TSL 2 BASIC19.27■□□□□ 0.68
CTGFP29279 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
CTGFP29279 MIR6799-201ENST00000620297 69 ntBASIC19.27■□□□□ 0.68
CTGFP29279 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CTGFP29279 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
CTGFP29279 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
CTGFP29279 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CTGFP29279 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CTGFP29279 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
CTGFP29279 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CTGFP29279 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
CTGFP29279 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC19.26■□□□□ 0.67
CTGFP29279 YBEY-202ENST00000339195 890 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CTGFP29279 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC19.26■□□□□ 0.67
CTGFP29279 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC19.26■□□□□ 0.67
CTGFP29279 RARRES2P9-201ENST00000565168 469 ntBASIC19.26■□□□□ 0.67
CTGFP29279 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC19.26■□□□□ 0.67
CTGFP29279 AC016727.1-204ENST00000578974 420 ntTSL 3 BASIC19.26■□□□□ 0.67
CTGFP29279 HIST1H2AB-201ENST00000615868 393 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
CTGFP29279 IGHV3-72-202ENST00000621503 303 ntBASIC19.26■□□□□ 0.67
CTGFP29279 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CTGFP29279 AL353732.1-201ENST00000569618 1459 ntBASIC19.26■□□□□ 0.67
CTGFP29279 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC19.26■□□□□ 0.67
CTGFP29279 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
CTGFP29279 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
CTGFP29279 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CTGFP29279 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CTGFP29279 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CTGFP29279 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
CTGFP29279 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
CTGFP29279 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CTGFP29279 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CTGFP29279 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
CTGFP29279 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC19.25■□□□□ 0.67
CTGFP29279 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC19.25■□□□□ 0.67
CTGFP29279 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC19.25■□□□□ 0.67
CTGFP29279 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CTGFP29279 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC19.25■□□□□ 0.67
CTGFP29279 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CTGFP29279 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CTGFP29279 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
CTGFP29279 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC19.25■□□□□ 0.67
CTGFP29279 AP3S2-216ENST00000617003 1561 ntBASIC19.25■□□□□ 0.67
CTGFP29279 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC19.25■□□□□ 0.67
CTGFP29279 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
CTGFP29279 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC19.25■□□□□ 0.67
CTGFP29279 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC19.25■□□□□ 0.67
CTGFP29279 DNAJC19-208ENST00000486355 828 ntTSL 2 BASIC19.25■□□□□ 0.67
CTGFP29279 DNAJC19-209ENST00000491873 769 ntTSL 2 BASIC19.25■□□□□ 0.67
CTGFP29279 CHMP2B-205ENST00000494980 1175 ntTSL 3 BASIC19.25■□□□□ 0.67
CTGFP29279 MTRF1LP2-201ENST00000506027 1122 ntBASIC19.25■□□□□ 0.67
CTGFP29279 LY6E-204ENST00000519546 971 ntTSL 2 BASIC19.25■□□□□ 0.67
CTGFP29279 ZFPL1-207ENST00000526791 384 ntTSL 3 BASIC19.25■□□□□ 0.67
CTGFP29279 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC19.25■□□□□ 0.67
CTGFP29279 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
CTGFP29279 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC19.25■□□□□ 0.67
CTGFP29279 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC19.25■□□□□ 0.67
CTGFP29279 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CTGFP29279 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CTGFP29279 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC19.25■□□□□ 0.67
CTGFP29279 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CTGFP29279 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC19.25■□□□□ 0.67
CTGFP29279 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC19.25■□□□□ 0.67
CTGFP29279 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC19.25■□□□□ 0.67
CTGFP29279 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC19.25■□□□□ 0.67
CTGFP29279 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC19.25■□□□□ 0.67
CTGFP29279 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC19.25■□□□□ 0.67
CTGFP29279 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC19.25■□□□□ 0.67
CTGFP29279 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CTGFP29279 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
CTGFP29279 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CTGFP29279 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CTGFP29279 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC19.24■□□□□ 0.67
CTGFP29279 CREB3L3-204ENST00000602147 1382 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CTGFP29279 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CTGFP29279 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC19.24■□□□□ 0.67
CTGFP29279 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CTGFP29279 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CTGFP29279 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CTGFP29279 VCX3B-202ENST00000381032 1171 ntAPPRIS P2 TSL 5 BASIC19.24■□□□□ 0.67
CTGFP29279 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CTGFP29279 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CTGFP29279 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC19.24■□□□□ 0.67
CTGFP29279 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CTGFP29279 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
CTGFP29279 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC19.24■□□□□ 0.67
CTGFP29279 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC19.24■□□□□ 0.67
CTGFP29279 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC19.24■□□□□ 0.67
CTGFP29279 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC19.24■□□□□ 0.67
CTGFP29279 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CTGFP29279 AC003101.2-201ENST00000612557 442 ntBASIC19.24■□□□□ 0.67
CTGFP29279 EIF6-209ENST00000621148 1054 ntAPPRIS P1 TSL 3 BASIC19.24■□□□□ 0.67
CTGFP29279 ZNF655-225ENST00000626122 705 ntTSL 5 BASIC19.24■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms