Protein–RNA interactions for Protein: P25067

COL8A2, Collagen alpha-2(VIII) chain, humanhuman

Predictions only

Length 703 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A2P25067 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
COL8A2P25067 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC14.62□□□□□ -0.07
COL8A2P25067 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC14.62□□□□□ -0.07
COL8A2P25067 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC14.62□□□□□ -0.07
COL8A2P25067 AL591424.1-201ENST00000442569 1213 ntBASIC14.62□□□□□ -0.07
COL8A2P25067 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
COL8A2P25067 PGAM5P1-201ENST00000518923 814 ntBASIC14.62□□□□□ -0.07
COL8A2P25067 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
COL8A2P25067 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC14.62□□□□□ -0.07
COL8A2P25067 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
COL8A2P25067 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
COL8A2P25067 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC14.62□□□□□ -0.07
COL8A2P25067 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
COL8A2P25067 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
COL8A2P25067 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC14.62□□□□□ -0.07
COL8A2P25067 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
COL8A2P25067 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
COL8A2P25067 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC14.62□□□□□ -0.07
COL8A2P25067 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC14.61□□□□□ -0.07
COL8A2P25067 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
COL8A2P25067 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
COL8A2P25067 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC14.61□□□□□ -0.07
COL8A2P25067 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC14.61□□□□□ -0.07
COL8A2P25067 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC14.61□□□□□ -0.07
COL8A2P25067 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
COL8A2P25067 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
COL8A2P25067 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
COL8A2P25067 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
COL8A2P25067 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
COL8A2P25067 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
COL8A2P25067 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
COL8A2P25067 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC14.61□□□□□ -0.07
COL8A2P25067 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
COL8A2P25067 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
COL8A2P25067 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC14.61□□□□□ -0.07
COL8A2P25067 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
COL8A2P25067 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
COL8A2P25067 PTCHD3P3-201ENST00000403073 906 ntBASIC14.61□□□□□ -0.07
COL8A2P25067 RPS15P9-201ENST00000494093 319 ntBASIC14.61□□□□□ -0.07
COL8A2P25067 NMU-202ENST00000505262 693 ntTSL 3 BASIC14.61□□□□□ -0.07
COL8A2P25067 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC14.61□□□□□ -0.07
COL8A2P25067 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC14.61□□□□□ -0.07
COL8A2P25067 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC14.61□□□□□ -0.07
COL8A2P25067 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC14.61□□□□□ -0.07
COL8A2P25067 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC14.61□□□□□ -0.07
COL8A2P25067 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC14.61□□□□□ -0.07
COL8A2P25067 AL353135.1-201ENST00000606729 504 ntBASIC14.61□□□□□ -0.07
COL8A2P25067 GPALPP1-207ENST00000611650 899 ntBASIC14.61□□□□□ -0.07
COL8A2P25067 AL139327.4-201ENST00000612362 153 ntBASIC14.61□□□□□ -0.07
COL8A2P25067 AC004790.2-201ENST00000623588 572 ntBASIC14.61□□□□□ -0.07
COL8A2P25067 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC14.61□□□□□ -0.07
COL8A2P25067 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC14.61□□□□□ -0.07
COL8A2P25067 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC14.61□□□□□ -0.07
COL8A2P25067 AC046185.3-201ENST00000623228 1824 ntBASIC14.61□□□□□ -0.07
COL8A2P25067 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
COL8A2P25067 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
COL8A2P25067 AC090340.1-201ENST00000620778 4980 ntBASIC14.61□□□□□ -0.07
COL8A2P25067 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
COL8A2P25067 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
COL8A2P25067 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
COL8A2P25067 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC14.6□□□□□ -0.07
COL8A2P25067 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC14.6□□□□□ -0.07
COL8A2P25067 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
COL8A2P25067 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC14.6□□□□□ -0.07
COL8A2P25067 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC14.6□□□□□ -0.07
COL8A2P25067 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
COL8A2P25067 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
COL8A2P25067 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
COL8A2P25067 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
COL8A2P25067 AC134043.2-201ENST00000624206 2238 ntBASIC14.6□□□□□ -0.07
COL8A2P25067 ENSA-206ENST00000361631 725 ntTSL 2 BASIC14.6□□□□□ -0.07
COL8A2P25067 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC14.6□□□□□ -0.07
COL8A2P25067 KRT18P13-201ENST00000400056 1290 ntBASIC14.6□□□□□ -0.07
COL8A2P25067 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC14.6□□□□□ -0.07
COL8A2P25067 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
COL8A2P25067 CRCP-205ENST00000431089 942 ntTSL 2 BASIC14.6□□□□□ -0.07
COL8A2P25067 SLC25A6P5-201ENST00000435663 894 ntBASIC14.6□□□□□ -0.07
COL8A2P25067 HS6ST1P1-201ENST00000481504 1234 ntBASIC14.6□□□□□ -0.07
COL8A2P25067 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC14.6□□□□□ -0.07
COL8A2P25067 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC14.6□□□□□ -0.07
COL8A2P25067 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC14.6□□□□□ -0.07
COL8A2P25067 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC14.6□□□□□ -0.07
COL8A2P25067 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC14.6□□□□□ -0.07
COL8A2P25067 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC14.6□□□□□ -0.07
COL8A2P25067 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC14.6□□□□□ -0.07
COL8A2P25067 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC14.6□□□□□ -0.07
COL8A2P25067 AC006538.3-201ENST00000612495 578 ntBASIC14.6□□□□□ -0.07
COL8A2P25067 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
COL8A2P25067 AL135999.2-201ENST00000622438 1686 ntBASIC14.6□□□□□ -0.07
COL8A2P25067 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC14.6□□□□□ -0.07
COL8A2P25067 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC14.6□□□□□ -0.07
COL8A2P25067 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
COL8A2P25067 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC14.6□□□□□ -0.07
COL8A2P25067 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC14.6□□□□□ -0.07
COL8A2P25067 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
COL8A2P25067 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC14.6□□□□□ -0.07
COL8A2P25067 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
COL8A2P25067 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
COL8A2P25067 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC14.6□□□□□ -0.07
COL8A2P25067 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 39.8 ms