Protein–RNA interactions for Protein: P12838

DEFA4, Neutrophil defensin 4, humanhuman

Predictions only

Length 97 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEFA4P12838 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
DEFA4P12838 ZMIZ2-202ENST00000309315 5144 ntAPPRIS P4 TSL 2 BASIC14.12□□□□□ -0.15
DEFA4P12838 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
DEFA4P12838 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC14.12□□□□□ -0.15
DEFA4P12838 AL121761.2-201ENST00000598007 1648 ntBASIC14.12□□□□□ -0.15
DEFA4P12838 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
DEFA4P12838 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
DEFA4P12838 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
DEFA4P12838 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
DEFA4P12838 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
DEFA4P12838 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC14.12□□□□□ -0.15
DEFA4P12838 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
DEFA4P12838 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
DEFA4P12838 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
DEFA4P12838 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
DEFA4P12838 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
DEFA4P12838 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
DEFA4P12838 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
DEFA4P12838 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
DEFA4P12838 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC14.12□□□□□ -0.15
DEFA4P12838 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC14.12□□□□□ -0.15
DEFA4P12838 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
DEFA4P12838 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
DEFA4P12838 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
DEFA4P12838 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
DEFA4P12838 DDT-203ENST00000403754 569 ntTSL 3 BASIC14.12□□□□□ -0.15
DEFA4P12838 DDT-206ENST00000430101 573 ntTSL 2 BASIC14.12□□□□□ -0.15
DEFA4P12838 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
DEFA4P12838 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC14.12□□□□□ -0.15
DEFA4P12838 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
DEFA4P12838 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC14.12□□□□□ -0.15
DEFA4P12838 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC14.12□□□□□ -0.15
DEFA4P12838 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC14.12□□□□□ -0.15
DEFA4P12838 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC14.12□□□□□ -0.15
DEFA4P12838 AC079602.3-201ENST00000623931 403 ntBASIC14.12□□□□□ -0.15
DEFA4P12838 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
DEFA4P12838 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC14.12□□□□□ -0.15
DEFA4P12838 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC14.12□□□□□ -0.15
DEFA4P12838 DAGLA-201ENST00000257215 5757 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
DEFA4P12838 LMAN1-201ENST00000251047 5521 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
DEFA4P12838 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
DEFA4P12838 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
DEFA4P12838 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC14.12□□□□□ -0.15
DEFA4P12838 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
DEFA4P12838 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
DEFA4P12838 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
DEFA4P12838 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC14.12□□□□□ -0.15
DEFA4P12838 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
DEFA4P12838 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
DEFA4P12838 GDF11-201ENST00000257868 8657 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
DEFA4P12838 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
DEFA4P12838 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
DEFA4P12838 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
DEFA4P12838 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
DEFA4P12838 RUNX1T1-246ENST00000523629 7537 ntAPPRIS P3 TSL 5 BASIC14.12□□□□□ -0.15
DEFA4P12838 PRLHR-201ENST00000239032 5446 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
DEFA4P12838 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
DEFA4P12838 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
DEFA4P12838 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
DEFA4P12838 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
DEFA4P12838 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
DEFA4P12838 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
DEFA4P12838 CCDC6-201ENST00000263102 5811 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
DEFA4P12838 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
DEFA4P12838 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC14.11□□□□□ -0.15
DEFA4P12838 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
DEFA4P12838 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
DEFA4P12838 AGGF1P2-201ENST00000426656 2106 ntBASIC14.11□□□□□ -0.15
DEFA4P12838 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
DEFA4P12838 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
DEFA4P12838 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC14.11□□□□□ -0.15
DEFA4P12838 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
DEFA4P12838 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
DEFA4P12838 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC14.11□□□□□ -0.15
DEFA4P12838 GNE-202ENST00000396594 5298 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
DEFA4P12838 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
DEFA4P12838 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
DEFA4P12838 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
DEFA4P12838 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
DEFA4P12838 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
DEFA4P12838 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
DEFA4P12838 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC14.11□□□□□ -0.15
DEFA4P12838 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
DEFA4P12838 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
DEFA4P12838 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
DEFA4P12838 HLA-F-220ENST00000434407 884 ntBASIC14.11□□□□□ -0.15
DEFA4P12838 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC14.11□□□□□ -0.15
DEFA4P12838 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
DEFA4P12838 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC14.11□□□□□ -0.15
DEFA4P12838 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
DEFA4P12838 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC14.11□□□□□ -0.15
DEFA4P12838 NUDT16-203ENST00000537561 5943 ntTSL 5 BASIC14.11□□□□□ -0.15
DEFA4P12838 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC14.11□□□□□ -0.15
DEFA4P12838 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC14.11□□□□□ -0.15
DEFA4P12838 TEN1-204ENST00000588202 862 ntTSL 3 BASIC14.11□□□□□ -0.15
DEFA4P12838 TK1-205ENST00000590862 642 ntTSL 3 BASIC14.11□□□□□ -0.15
DEFA4P12838 AC073508.3-201ENST00000619697 1419 ntBASIC14.11□□□□□ -0.15
DEFA4P12838 LITAF-220ENST00000620789 692 ntTSL 5 BASIC14.11□□□□□ -0.15
DEFA4P12838 AL138688.1-201ENST00000624851 1594 ntBASIC14.11□□□□□ -0.15
DEFA4P12838 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 32.6 ms