Protein–RNA interactions for Protein: P11831

SRF, Serum response factor, humanhuman

Predictions only

Length 508 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRFP11831 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SRFP11831 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
SRFP11831 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
SRFP11831 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
SRFP11831 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
SRFP11831 SYNGR1-205ENST00000406293 564 ntTSL 2 BASIC17.34■□□□□ 0.37
SRFP11831 HLA-V-201ENST00000429037 534 ntBASIC17.34■□□□□ 0.37
SRFP11831 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC17.34■□□□□ 0.37
SRFP11831 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
SRFP11831 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC17.34■□□□□ 0.37
SRFP11831 MTRF1LP2-201ENST00000506027 1122 ntBASIC17.34■□□□□ 0.37
SRFP11831 ATG10-207ENST00000513443 978 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
SRFP11831 STMN4-207ENST00000523048 1224 ntTSL 2 BASIC17.34■□□□□ 0.37
SRFP11831 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC17.34■□□□□ 0.37
SRFP11831 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC17.34■□□□□ 0.37
SRFP11831 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SRFP11831 AC004233.3-201ENST00000607794 1269 ntBASIC17.34■□□□□ 0.37
SRFP11831 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
SRFP11831 AC100757.3-201ENST00000622361 1406 ntBASIC17.34■□□□□ 0.37
SRFP11831 AL590560.3-201ENST00000623350 461 ntBASIC17.34■□□□□ 0.37
SRFP11831 LINC01451-201ENST00000623792 534 ntBASIC17.34■□□□□ 0.37
SRFP11831 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC17.34■□□□□ 0.37
SRFP11831 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC17.34■□□□□ 0.37
SRFP11831 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SRFP11831 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.37
SRFP11831 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.37
SRFP11831 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
SRFP11831 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
SRFP11831 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC17.33■□□□□ 0.37
SRFP11831 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.37
SRFP11831 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
SRFP11831 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
SRFP11831 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
SRFP11831 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
SRFP11831 AIP-201ENST00000279146 1221 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
SRFP11831 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
SRFP11831 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
SRFP11831 PABPN1L-202ENST00000419291 1272 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
SRFP11831 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC17.33■□□□□ 0.36
SRFP11831 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC17.33■□□□□ 0.36
SRFP11831 MIR3909-201ENST00000579518 119 ntBASIC17.33■□□□□ 0.36
SRFP11831 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC17.33■□□□□ 0.36
SRFP11831 AL031055.1-201ENST00000606362 631 ntBASIC17.33■□□□□ 0.36
SRFP11831 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
SRFP11831 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
SRFP11831 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC17.33■□□□□ 0.36
SRFP11831 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
SRFP11831 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
SRFP11831 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
SRFP11831 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
SRFP11831 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC17.33■□□□□ 0.36
SRFP11831 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC17.32■□□□□ 0.36
SRFP11831 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
SRFP11831 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
SRFP11831 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SRFP11831 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
SRFP11831 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
SRFP11831 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SRFP11831 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SRFP11831 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
SRFP11831 LINC01116-202ENST00000339037 838 ntTSL 3 BASIC17.32■□□□□ 0.36
SRFP11831 CALY-202ENST00000368555 783 ntTSL 2 BASIC17.32■□□□□ 0.36
SRFP11831 NDUFB8-202ENST00000370320 684 ntTSL 3 BASIC17.32■□□□□ 0.36
SRFP11831 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC17.32■□□□□ 0.36
SRFP11831 RNU1-129P-201ENST00000384064 167 ntBASIC17.32■□□□□ 0.36
SRFP11831 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC17.32■□□□□ 0.36
SRFP11831 TSSK5P-201ENST00000423978 907 ntBASIC17.32■□□□□ 0.36
SRFP11831 LINC00473-201ENST00000444465 798 ntTSL 3 BASIC17.32■□□□□ 0.36
SRFP11831 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
SRFP11831 NAA50-208ENST00000497255 789 ntTSL 5 BASIC17.32■□□□□ 0.36
SRFP11831 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
SRFP11831 MRPL36-204ENST00000508987 686 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
SRFP11831 CCDC25-209ENST00000522915 785 ntTSL 3 BASIC17.32■□□□□ 0.36
SRFP11831 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC17.32■□□□□ 0.36
SRFP11831 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
SRFP11831 AL132711.1-201ENST00000557546 722 ntTSL 3 BASIC17.32■□□□□ 0.36
SRFP11831 U1.21-201ENST00000580816 167 ntBASIC17.32■□□□□ 0.36
SRFP11831 SRP9-204ENST00000619790 377 ntTSL 2 BASIC17.32■□□□□ 0.36
SRFP11831 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC17.32■□□□□ 0.36
SRFP11831 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
SRFP11831 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SRFP11831 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SRFP11831 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SRFP11831 AC022144.1-201ENST00000602255 1580 ntBASIC17.32■□□□□ 0.36
SRFP11831 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC17.31■□□□□ 0.36
SRFP11831 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC17.31■□□□□ 0.36
SRFP11831 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SRFP11831 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
SRFP11831 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SRFP11831 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
SRFP11831 FAM172A-206ENST00000509163 1369 ntTSL 2 BASIC17.31■□□□□ 0.36
SRFP11831 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC17.31■□□□□ 0.36
SRFP11831 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC17.31■□□□□ 0.36
SRFP11831 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SRFP11831 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
SRFP11831 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC17.31■□□□□ 0.36
SRFP11831 AL136311.1-206ENST00000416069 899 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
SRFP11831 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC17.31■□□□□ 0.36
SRFP11831 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC17.31■□□□□ 0.36
SRFP11831 MUTYH-237ENST00000531105 501 ntTSL 5 BASIC17.31■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 30.9 ms