Protein–RNA interactions for Protein: P10276

RARA, Retinoic acid receptor alpha, humanhuman

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RARAP10276 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC18.18■□□□□ 0.5
RARAP10276 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC18.18■□□□□ 0.5
RARAP10276 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
RARAP10276 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
RARAP10276 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
RARAP10276 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
RARAP10276 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
RARAP10276 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
RARAP10276 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
RARAP10276 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
RARAP10276 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
RARAP10276 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
RARAP10276 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
RARAP10276 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
RARAP10276 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC18.18■□□□□ 0.5
RARAP10276 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC18.18■□□□□ 0.5
RARAP10276 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC18.18■□□□□ 0.5
RARAP10276 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC18.18■□□□□ 0.5
RARAP10276 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
RARAP10276 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
RARAP10276 INTS4P1-201ENST00000438455 1935 ntBASIC18.17■□□□□ 0.5
RARAP10276 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC18.17■□□□□ 0.5
RARAP10276 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
RARAP10276 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
RARAP10276 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
RARAP10276 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
RARAP10276 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
RARAP10276 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
RARAP10276 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
RARAP10276 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
RARAP10276 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC18.17■□□□□ 0.5
RARAP10276 RCN1P2-201ENST00000398357 915 ntBASIC18.17■□□□□ 0.5
RARAP10276 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
RARAP10276 AC096582.2-201ENST00000510860 516 ntBASIC18.17■□□□□ 0.5
RARAP10276 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
RARAP10276 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC18.17■□□□□ 0.5
RARAP10276 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
RARAP10276 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
RARAP10276 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
RARAP10276 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
RARAP10276 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC18.17■□□□□ 0.5
RARAP10276 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
RARAP10276 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
RARAP10276 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
RARAP10276 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
RARAP10276 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC18.17■□□□□ 0.5
RARAP10276 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
RARAP10276 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC18.16■□□□□ 0.5
RARAP10276 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
RARAP10276 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
RARAP10276 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
RARAP10276 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC18.16■□□□□ 0.5
RARAP10276 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
RARAP10276 AC093525.9-201ENST00000624961 1746 ntBASIC18.16■□□□□ 0.5
RARAP10276 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
RARAP10276 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
RARAP10276 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
RARAP10276 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC18.16■□□□□ 0.5
RARAP10276 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
RARAP10276 CTNS-203ENST00000399306 803 ntTSL 3 BASIC18.16■□□□□ 0.5
RARAP10276 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC18.16■□□□□ 0.5
RARAP10276 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC18.16■□□□□ 0.5
RARAP10276 BET1L-206ENST00000486280 665 ntTSL 3 BASIC18.16■□□□□ 0.5
RARAP10276 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
RARAP10276 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
RARAP10276 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC18.16■□□□□ 0.5
RARAP10276 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC18.16■□□□□ 0.5
RARAP10276 AC092329.2-201ENST00000598402 547 ntBASIC18.16■□□□□ 0.5
RARAP10276 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
RARAP10276 AD001527.2-201ENST00000622994 785 ntBASIC18.16■□□□□ 0.5
RARAP10276 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC18.16■□□□□ 0.5
RARAP10276 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
RARAP10276 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
RARAP10276 FUT8-AS1-201ENST00000621019 1521 ntBASIC18.16■□□□□ 0.5
RARAP10276 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
RARAP10276 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
RARAP10276 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
RARAP10276 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
RARAP10276 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
RARAP10276 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
RARAP10276 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC18.15■□□□□ 0.5
RARAP10276 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
RARAP10276 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC18.15■□□□□ 0.5
RARAP10276 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
RARAP10276 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
RARAP10276 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
RARAP10276 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
RARAP10276 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
RARAP10276 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
RARAP10276 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
RARAP10276 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
RARAP10276 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC18.15■□□□□ 0.5
RARAP10276 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
RARAP10276 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
RARAP10276 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
RARAP10276 AC132938.5-201ENST00000624980 1813 ntBASIC18.15■□□□□ 0.5
RARAP10276 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
RARAP10276 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
RARAP10276 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
RARAP10276 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 49.6 ms