Protein–RNA interactions for Protein: O43395

PRPF3, U4/U6 small nuclear ribonucleoprotein Prp3, humanhuman

Known RBP Predictions only

Length 683 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF3O43395 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC19.87■□□□□ 0.77
PRPF3O43395 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC19.87■□□□□ 0.77
PRPF3O43395 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
PRPF3O43395 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
PRPF3O43395 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
PRPF3O43395 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
PRPF3O43395 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC19.87■□□□□ 0.77
PRPF3O43395 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC19.87■□□□□ 0.77
PRPF3O43395 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC19.87■□□□□ 0.77
PRPF3O43395 AC012640.2-201ENST00000561606 901 ntBASIC19.87■□□□□ 0.77
PRPF3O43395 SLC25A6P4-201ENST00000586535 553 ntBASIC19.87■□□□□ 0.77
PRPF3O43395 AL121894.2-201ENST00000602977 491 ntBASIC19.87■□□□□ 0.77
PRPF3O43395 FAM215A-202ENST00000632077 792 ntBASIC19.87■□□□□ 0.77
PRPF3O43395 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
PRPF3O43395 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
PRPF3O43395 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
PRPF3O43395 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
PRPF3O43395 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
PRPF3O43395 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
PRPF3O43395 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
PRPF3O43395 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC19.87■□□□□ 0.77
PRPF3O43395 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
PRPF3O43395 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC19.87■□□□□ 0.77
PRPF3O43395 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
PRPF3O43395 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC19.86■□□□□ 0.77
PRPF3O43395 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
PRPF3O43395 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
PRPF3O43395 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
PRPF3O43395 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC19.86■□□□□ 0.77
PRPF3O43395 AP002414.1-201ENST00000391405 1147 ntBASIC19.86■□□□□ 0.77
PRPF3O43395 PTCHD3P3-201ENST00000403073 906 ntBASIC19.86■□□□□ 0.77
PRPF3O43395 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
PRPF3O43395 AC009078.2-202ENST00000463353 338 ntBASIC19.86■□□□□ 0.77
PRPF3O43395 RNA5SP419-201ENST00000515908 135 ntBASIC19.86■□□□□ 0.77
PRPF3O43395 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC19.86■□□□□ 0.77
PRPF3O43395 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC19.86■□□□□ 0.77
PRPF3O43395 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC19.86■□□□□ 0.77
PRPF3O43395 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC19.86■□□□□ 0.77
PRPF3O43395 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC19.86■□□□□ 0.77
PRPF3O43395 AL773604.1-201ENST00000617417 272 ntBASIC19.86■□□□□ 0.77
PRPF3O43395 HNRNPRP1-201ENST00000453465 1695 ntBASIC19.86■□□□□ 0.77
PRPF3O43395 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
PRPF3O43395 AC060834.1-201ENST00000443027 2032 ntBASIC19.86■□□□□ 0.77
PRPF3O43395 AC080080.1-201ENST00000625121 2420 ntBASIC19.86■□□□□ 0.77
PRPF3O43395 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
PRPF3O43395 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
PRPF3O43395 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC19.86■□□□□ 0.77
PRPF3O43395 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
PRPF3O43395 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC19.85■□□□□ 0.77
PRPF3O43395 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC19.85■□□□□ 0.77
PRPF3O43395 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
PRPF3O43395 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
PRPF3O43395 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
PRPF3O43395 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
PRPF3O43395 RPS2P28-201ENST00000314255 741 ntBASIC19.85■□□□□ 0.77
PRPF3O43395 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
PRPF3O43395 ELK2BP-201ENST00000415014 1224 ntBASIC19.85■□□□□ 0.77
PRPF3O43395 AL031284.1-201ENST00000419297 478 ntBASIC19.85■□□□□ 0.77
PRPF3O43395 CBFB-203ENST00000561924 584 ntTSL 5 BASIC19.85■□□□□ 0.77
PRPF3O43395 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC19.85■□□□□ 0.77
PRPF3O43395 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC19.85■□□□□ 0.77
PRPF3O43395 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
PRPF3O43395 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
PRPF3O43395 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC19.85■□□□□ 0.77
PRPF3O43395 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
PRPF3O43395 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC19.85■□□□□ 0.77
PRPF3O43395 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC19.85■□□□□ 0.77
PRPF3O43395 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC19.85■□□□□ 0.77
PRPF3O43395 AC106820.2-201ENST00000563775 3264 ntBASIC19.85■□□□□ 0.77
PRPF3O43395 AC020916.1-201ENST00000587762 1774 ntBASIC19.85■□□□□ 0.77
PRPF3O43395 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
PRPF3O43395 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC19.85■□□□□ 0.77
PRPF3O43395 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
PRPF3O43395 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
PRPF3O43395 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC19.85■□□□□ 0.77
PRPF3O43395 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
PRPF3O43395 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
PRPF3O43395 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
PRPF3O43395 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC19.84■□□□□ 0.77
PRPF3O43395 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC19.84■□□□□ 0.77
PRPF3O43395 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
PRPF3O43395 AC012313.1-201ENST00000593393 3059 ntBASIC19.84■□□□□ 0.77
PRPF3O43395 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
PRPF3O43395 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
PRPF3O43395 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
PRPF3O43395 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC19.84■□□□□ 0.77
PRPF3O43395 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
PRPF3O43395 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
PRPF3O43395 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC19.84■□□□□ 0.77
PRPF3O43395 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC19.84■□□□□ 0.77
PRPF3O43395 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC19.84■□□□□ 0.77
PRPF3O43395 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC19.84■□□□□ 0.77
PRPF3O43395 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC19.84■□□□□ 0.77
PRPF3O43395 AC105339.3-201ENST00000560043 636 ntBASIC19.84■□□□□ 0.77
PRPF3O43395 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC19.84■□□□□ 0.77
PRPF3O43395 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC19.84■□□□□ 0.77
PRPF3O43395 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC19.84■□□□□ 0.77
PRPF3O43395 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
PRPF3O43395 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
PRPF3O43395 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms