Protein–RNA interactions for Protein: O43307

ARHGEF9, Rho guanine nucleotide exchange factor 9, humanhuman

Predictions only

Length 516 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF9O43307 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC16.13■□□□□ 0.17
ARHGEF9O43307 AC006116.8-202ENST00000587620 1550 ntBASIC16.13■□□□□ 0.17
ARHGEF9O43307 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC16.13■□□□□ 0.17
ARHGEF9O43307 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
ARHGEF9O43307 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
ARHGEF9O43307 IBA57-201ENST00000366711 7817 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
ARHGEF9O43307 LMAN1-201ENST00000251047 5521 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
ARHGEF9O43307 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC16.12■□□□□ 0.17
ARHGEF9O43307 TC2N-201ENST00000340892 4708 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
ARHGEF9O43307 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
ARHGEF9O43307 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC16.12■□□□□ 0.17
ARHGEF9O43307 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC16.12■□□□□ 0.17
ARHGEF9O43307 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC16.12■□□□□ 0.17
ARHGEF9O43307 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
ARHGEF9O43307 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
ARHGEF9O43307 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
ARHGEF9O43307 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
ARHGEF9O43307 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
ARHGEF9O43307 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
ARHGEF9O43307 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC16.12■□□□□ 0.17
ARHGEF9O43307 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
ARHGEF9O43307 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
ARHGEF9O43307 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
ARHGEF9O43307 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC16.12■□□□□ 0.17
ARHGEF9O43307 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
ARHGEF9O43307 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
ARHGEF9O43307 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC16.12■□□□□ 0.17
ARHGEF9O43307 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC16.12■□□□□ 0.17
ARHGEF9O43307 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
ARHGEF9O43307 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC16.12■□□□□ 0.17
ARHGEF9O43307 DUTP2-201ENST00000519164 463 ntBASIC16.12■□□□□ 0.17
ARHGEF9O43307 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC16.12■□□□□ 0.17
ARHGEF9O43307 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC16.12■□□□□ 0.17
ARHGEF9O43307 RN7SL510P-201ENST00000581311 263 ntBASIC16.12■□□□□ 0.17
ARHGEF9O43307 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC16.12■□□□□ 0.17
ARHGEF9O43307 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
ARHGEF9O43307 AC092119.3-201ENST00000612618 583 ntBASIC16.12■□□□□ 0.17
ARHGEF9O43307 DFFB-212ENST00000625756 649 ntTSL 5 BASIC16.12■□□□□ 0.17
ARHGEF9O43307 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
ARHGEF9O43307 AC011676.5-201ENST00000624864 2660 ntBASIC16.12■□□□□ 0.17
ARHGEF9O43307 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
ARHGEF9O43307 GNE-202ENST00000396594 5298 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
ARHGEF9O43307 WDR97-201ENST00000323662 6916 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
ARHGEF9O43307 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
ARHGEF9O43307 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
ARHGEF9O43307 NFATC4-204ENST00000424781 5488 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
ARHGEF9O43307 CHDH-201ENST00000315251 7665 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
ARHGEF9O43307 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
ARHGEF9O43307 HAND2-AS1-202ENST00000502896 5278 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
ARHGEF9O43307 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
ARHGEF9O43307 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
ARHGEF9O43307 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
ARHGEF9O43307 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
ARHGEF9O43307 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC16.11■□□□□ 0.17
ARHGEF9O43307 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC16.11■□□□□ 0.17
ARHGEF9O43307 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC16.11■□□□□ 0.17
ARHGEF9O43307 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
ARHGEF9O43307 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
ARHGEF9O43307 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
ARHGEF9O43307 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
ARHGEF9O43307 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
ARHGEF9O43307 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
ARHGEF9O43307 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC16.11■□□□□ 0.17
ARHGEF9O43307 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
ARHGEF9O43307 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
ARHGEF9O43307 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
ARHGEF9O43307 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC16.11■□□□□ 0.17
ARHGEF9O43307 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC16.11■□□□□ 0.17
ARHGEF9O43307 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
ARHGEF9O43307 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC16.11■□□□□ 0.17
ARHGEF9O43307 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC16.11■□□□□ 0.17
ARHGEF9O43307 HYMAI.1-201ENST00000620949 238 ntBASIC16.11■□□□□ 0.17
ARHGEF9O43307 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
ARHGEF9O43307 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
ARHGEF9O43307 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
ARHGEF9O43307 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
ARHGEF9O43307 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
ARHGEF9O43307 AC022898.2-201ENST00000616822 1312 ntBASIC16.11■□□□□ 0.17
ARHGEF9O43307 DPYSL3-201ENST00000343218 5476 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
ARHGEF9O43307 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC16.11■□□□□ 0.17
ARHGEF9O43307 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
ARHGEF9O43307 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC16.11■□□□□ 0.17
ARHGEF9O43307 PHLDA1-203ENST00000619060 5913 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
ARHGEF9O43307 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC16.11■□□□□ 0.17
ARHGEF9O43307 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
ARHGEF9O43307 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
ARHGEF9O43307 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
ARHGEF9O43307 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC16.11■□□□□ 0.17
ARHGEF9O43307 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
ARHGEF9O43307 LINC00602-201ENST00000629776 2065 ntBASIC16.1■□□□□ 0.17
ARHGEF9O43307 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC16.1■□□□□ 0.17
ARHGEF9O43307 MAP3K4-202ENST00000366919 5397 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
ARHGEF9O43307 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
ARHGEF9O43307 PIK3CD-206ENST00000536656 5483 ntTSL 5 BASIC16.1■□□□□ 0.17
ARHGEF9O43307 PIK3CD-208ENST00000628140 5483 ntTSL 5 BASIC16.1■□□□□ 0.17
ARHGEF9O43307 NBPF9-207ENST00000615421 5835 ntAPPRIS P2 TSL 5 BASIC16.1■□□□□ 0.17
ARHGEF9O43307 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC16.1■□□□□ 0.17
ARHGEF9O43307 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
ARHGEF9O43307 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
ARHGEF9O43307 PAK2-201ENST00000327134 6139 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms