Protein–RNA interactions for Protein: O15379

HDAC3, Histone deacetylase 3, humanhuman

Predictions only

Length 428 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3O15379 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
HDAC3O15379 EGFEM1P-202ENST00000431685 1563 ntBASIC16.87■□□□□ 0.29
HDAC3O15379 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
HDAC3O15379 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
HDAC3O15379 SPDYE15P-201ENST00000424157 909 ntBASIC16.87■□□□□ 0.29
HDAC3O15379 SAPCD2P2-201ENST00000431719 1174 ntBASIC16.87■□□□□ 0.29
HDAC3O15379 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC16.87■□□□□ 0.29
HDAC3O15379 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
HDAC3O15379 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC16.87■□□□□ 0.29
HDAC3O15379 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
HDAC3O15379 ZNF444P1-201ENST00000559497 298 ntBASIC16.87■□□□□ 0.29
HDAC3O15379 AC109462.3-201ENST00000573934 613 ntBASIC16.87■□□□□ 0.29
HDAC3O15379 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
HDAC3O15379 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC16.87■□□□□ 0.29
HDAC3O15379 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC16.87■□□□□ 0.29
HDAC3O15379 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
HDAC3O15379 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
HDAC3O15379 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
HDAC3O15379 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
HDAC3O15379 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
HDAC3O15379 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
HDAC3O15379 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC16.86■□□□□ 0.29
HDAC3O15379 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
HDAC3O15379 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC16.86■□□□□ 0.29
HDAC3O15379 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
HDAC3O15379 AL162727.3-201ENST00000635661 2787 ntBASIC16.86■□□□□ 0.29
HDAC3O15379 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC16.86■□□□□ 0.29
HDAC3O15379 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
HDAC3O15379 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC16.86■□□□□ 0.29
HDAC3O15379 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC16.86■□□□□ 0.29
HDAC3O15379 CYP2T1P-202ENST00000641596 2535 ntBASIC16.86■□□□□ 0.29
HDAC3O15379 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
HDAC3O15379 MIR662-201ENST00000384847 95 ntBASIC16.86■□□□□ 0.29
HDAC3O15379 STARP1-201ENST00000397973 869 ntBASIC16.86■□□□□ 0.29
HDAC3O15379 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC16.86■□□□□ 0.29
HDAC3O15379 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC16.86■□□□□ 0.29
HDAC3O15379 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC16.86■□□□□ 0.29
HDAC3O15379 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
HDAC3O15379 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC16.86■□□□□ 0.29
HDAC3O15379 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC16.86■□□□□ 0.29
HDAC3O15379 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
HDAC3O15379 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
HDAC3O15379 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
HDAC3O15379 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
HDAC3O15379 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
HDAC3O15379 GCK-209ENST00000616242 2260 ntTSL 5 BASIC16.86■□□□□ 0.29
HDAC3O15379 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC16.86■□□□□ 0.29
HDAC3O15379 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
HDAC3O15379 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
HDAC3O15379 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
HDAC3O15379 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC16.86■□□□□ 0.29
HDAC3O15379 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC16.86■□□□□ 0.29
HDAC3O15379 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC16.85■□□□□ 0.29
HDAC3O15379 STX3-203ENST00000529177 1571 ntTSL 2 BASIC16.85■□□□□ 0.29
HDAC3O15379 LINC02199-201ENST00000506655 2702 ntBASIC16.85■□□□□ 0.29
HDAC3O15379 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC16.85■□□□□ 0.29
HDAC3O15379 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC16.85■□□□□ 0.29
HDAC3O15379 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC16.85■□□□□ 0.29
HDAC3O15379 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC16.85■□□□□ 0.29
HDAC3O15379 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
HDAC3O15379 AL391005.1-201ENST00000623953 2435 ntBASIC16.85■□□□□ 0.29
HDAC3O15379 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
HDAC3O15379 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
HDAC3O15379 AC008894.3-201ENST00000624324 3103 ntBASIC16.85■□□□□ 0.29
HDAC3O15379 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
HDAC3O15379 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
HDAC3O15379 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
HDAC3O15379 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
HDAC3O15379 ANKRD20A18P-201ENST00000359341 492 ntBASIC16.85■□□□□ 0.29
HDAC3O15379 ENSA-206ENST00000361631 725 ntTSL 2 BASIC16.85■□□□□ 0.29
HDAC3O15379 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
HDAC3O15379 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
HDAC3O15379 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
HDAC3O15379 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC16.85■□□□□ 0.29
HDAC3O15379 AL441883.1-201ENST00000566170 1045 ntBASIC16.85■□□□□ 0.29
HDAC3O15379 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC16.85■□□□□ 0.29
HDAC3O15379 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC16.85■□□□□ 0.29
HDAC3O15379 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC16.85■□□□□ 0.29
HDAC3O15379 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
HDAC3O15379 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
HDAC3O15379 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
HDAC3O15379 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
HDAC3O15379 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
HDAC3O15379 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
HDAC3O15379 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
HDAC3O15379 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
HDAC3O15379 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC16.85■□□□□ 0.29
HDAC3O15379 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
HDAC3O15379 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC16.85■□□□□ 0.29
HDAC3O15379 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC16.85■□□□□ 0.29
HDAC3O15379 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
HDAC3O15379 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC16.85■□□□□ 0.29
HDAC3O15379 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC16.85■□□□□ 0.29
HDAC3O15379 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC16.85■□□□□ 0.29
HDAC3O15379 AC079328.2-201ENST00000561241 3354 ntBASIC16.85■□□□□ 0.29
HDAC3O15379 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
HDAC3O15379 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
HDAC3O15379 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
HDAC3O15379 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
HDAC3O15379 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC16.84■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 54.8 ms