Protein–RNA interactions for Protein: E9PIF3

NPIPA2, Nuclear pore complex-interacting protein family member A2, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA2E9PIF3 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
NPIPA2E9PIF3 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC15.79■□□□□ 0.12
NPIPA2E9PIF3 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC15.79■□□□□ 0.12
NPIPA2E9PIF3 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC15.79■□□□□ 0.12
NPIPA2E9PIF3 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC15.79■□□□□ 0.12
NPIPA2E9PIF3 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC15.79■□□□□ 0.12
NPIPA2E9PIF3 AC109462.3-201ENST00000573934 613 ntBASIC15.79■□□□□ 0.12
NPIPA2E9PIF3 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC15.79■□□□□ 0.12
NPIPA2E9PIF3 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC15.79■□□□□ 0.12
NPIPA2E9PIF3 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC15.79■□□□□ 0.12
NPIPA2E9PIF3 FAM197Y3-203ENST00000618346 717 ntBASIC15.79■□□□□ 0.12
NPIPA2E9PIF3 AC005593.1-201ENST00000624894 515 ntBASIC15.79■□□□□ 0.12
NPIPA2E9PIF3 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC15.79■□□□□ 0.12
NPIPA2E9PIF3 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
NPIPA2E9PIF3 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
NPIPA2E9PIF3 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
NPIPA2E9PIF3 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC15.79■□□□□ 0.12
NPIPA2E9PIF3 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC15.79■□□□□ 0.12
NPIPA2E9PIF3 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
NPIPA2E9PIF3 PC-208ENST00000529047 1607 ntTSL 3 BASIC15.79■□□□□ 0.12
NPIPA2E9PIF3 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
NPIPA2E9PIF3 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC15.79■□□□□ 0.12
NPIPA2E9PIF3 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
NPIPA2E9PIF3 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC15.78■□□□□ 0.12
NPIPA2E9PIF3 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
NPIPA2E9PIF3 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
NPIPA2E9PIF3 AL353593.2-201ENST00000602529 1483 ntBASIC15.78■□□□□ 0.12
NPIPA2E9PIF3 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
NPIPA2E9PIF3 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
NPIPA2E9PIF3 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
NPIPA2E9PIF3 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
NPIPA2E9PIF3 AC132938.5-201ENST00000624980 1813 ntBASIC15.78■□□□□ 0.12
NPIPA2E9PIF3 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
NPIPA2E9PIF3 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
NPIPA2E9PIF3 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
NPIPA2E9PIF3 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
NPIPA2E9PIF3 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
NPIPA2E9PIF3 FOXO3-201ENST00000343882 7308 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
NPIPA2E9PIF3 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
NPIPA2E9PIF3 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC15.78■□□□□ 0.12
NPIPA2E9PIF3 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
NPIPA2E9PIF3 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC15.78■□□□□ 0.12
NPIPA2E9PIF3 LBH-204ENST00000406087 559 ntTSL 4 BASIC15.78■□□□□ 0.12
NPIPA2E9PIF3 MIR1233-2-201ENST00000408138 82 ntBASIC15.78■□□□□ 0.12
NPIPA2E9PIF3 MIR1233-1-201ENST00000408722 82 ntBASIC15.78■□□□□ 0.12
NPIPA2E9PIF3 KLF4P1-201ENST00000412782 1185 ntBASIC15.78■□□□□ 0.12
NPIPA2E9PIF3 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC15.78■□□□□ 0.12
NPIPA2E9PIF3 AL591424.1-201ENST00000442569 1213 ntBASIC15.78■□□□□ 0.12
NPIPA2E9PIF3 KRT18P3-201ENST00000451602 1288 ntBASIC15.78■□□□□ 0.12
NPIPA2E9PIF3 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC15.78■□□□□ 0.12
NPIPA2E9PIF3 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC15.78■□□□□ 0.12
NPIPA2E9PIF3 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC15.78■□□□□ 0.12
NPIPA2E9PIF3 CYB561-217ENST00000582997 877 ntTSL 5 BASIC15.78■□□□□ 0.12
NPIPA2E9PIF3 CYGB-205ENST00000590175 830 ntTSL 3 BASIC15.78■□□□□ 0.12
NPIPA2E9PIF3 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
NPIPA2E9PIF3 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
NPIPA2E9PIF3 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
NPIPA2E9PIF3 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC15.78■□□□□ 0.12
NPIPA2E9PIF3 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
NPIPA2E9PIF3 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC15.78■□□□□ 0.12
NPIPA2E9PIF3 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC15.78■□□□□ 0.12
NPIPA2E9PIF3 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC15.78■□□□□ 0.12
NPIPA2E9PIF3 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
NPIPA2E9PIF3 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC15.78■□□□□ 0.12
NPIPA2E9PIF3 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
NPIPA2E9PIF3 FUT8-AS1-201ENST00000621019 1521 ntBASIC15.78■□□□□ 0.12
NPIPA2E9PIF3 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
NPIPA2E9PIF3 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
NPIPA2E9PIF3 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
NPIPA2E9PIF3 AL355312.1-201ENST00000407115 2176 ntBASIC15.77■□□□□ 0.12
NPIPA2E9PIF3 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
NPIPA2E9PIF3 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC15.77■□□□□ 0.12
NPIPA2E9PIF3 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC15.77■□□□□ 0.12
NPIPA2E9PIF3 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC15.77■□□□□ 0.12
NPIPA2E9PIF3 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC15.77■□□□□ 0.12
NPIPA2E9PIF3 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
NPIPA2E9PIF3 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC15.77■□□□□ 0.12
NPIPA2E9PIF3 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC15.77■□□□□ 0.12
NPIPA2E9PIF3 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC15.77■□□□□ 0.12
NPIPA2E9PIF3 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.12
NPIPA2E9PIF3 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.12
NPIPA2E9PIF3 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC15.77■□□□□ 0.12
NPIPA2E9PIF3 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
NPIPA2E9PIF3 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
NPIPA2E9PIF3 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
NPIPA2E9PIF3 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
NPIPA2E9PIF3 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
NPIPA2E9PIF3 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.12
NPIPA2E9PIF3 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
NPIPA2E9PIF3 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC15.77■□□□□ 0.12
NPIPA2E9PIF3 COX10-202ENST00000429152 875 ntTSL 2 BASIC15.77■□□□□ 0.12
NPIPA2E9PIF3 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC15.77■□□□□ 0.12
NPIPA2E9PIF3 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
NPIPA2E9PIF3 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC15.77■□□□□ 0.12
NPIPA2E9PIF3 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC15.77■□□□□ 0.12
NPIPA2E9PIF3 LINC01451-201ENST00000623792 534 ntBASIC15.77■□□□□ 0.12
NPIPA2E9PIF3 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.12
NPIPA2E9PIF3 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
NPIPA2E9PIF3 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
NPIPA2E9PIF3 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC15.77■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 36.8 ms