Protein–RNA interactions for Protein: Q9Y6V7

DDX49, Probable ATP-dependent RNA helicase DDX49, humanhuman

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX49Q9Y6V7 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
DDX49Q9Y6V7 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
DDX49Q9Y6V7 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
DDX49Q9Y6V7 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC20.85■□□□□ 0.93
DDX49Q9Y6V7 PCDH8P1-201ENST00000428983 2773 ntBASIC20.85■□□□□ 0.93
DDX49Q9Y6V7 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
DDX49Q9Y6V7 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
DDX49Q9Y6V7 KRT17P6-201ENST00000453795 1220 ntBASIC20.85■□□□□ 0.93
DDX49Q9Y6V7 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
DDX49Q9Y6V7 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC20.85■□□□□ 0.93
DDX49Q9Y6V7 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
DDX49Q9Y6V7 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
DDX49Q9Y6V7 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
DDX49Q9Y6V7 AC106886.4-201ENST00000623557 2502 ntBASIC20.85■□□□□ 0.93
DDX49Q9Y6V7 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
DDX49Q9Y6V7 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
DDX49Q9Y6V7 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC20.85■□□□□ 0.93
DDX49Q9Y6V7 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
DDX49Q9Y6V7 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
DDX49Q9Y6V7 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
DDX49Q9Y6V7 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
DDX49Q9Y6V7 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC20.84■□□□□ 0.93
DDX49Q9Y6V7 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC20.84■□□□□ 0.93
DDX49Q9Y6V7 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
DDX49Q9Y6V7 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
DDX49Q9Y6V7 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
DDX49Q9Y6V7 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC20.84■□□□□ 0.93
DDX49Q9Y6V7 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
DDX49Q9Y6V7 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
DDX49Q9Y6V7 AKR1C7P-201ENST00000305623 895 ntBASIC20.84■□□□□ 0.93
DDX49Q9Y6V7 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
DDX49Q9Y6V7 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC20.84■□□□□ 0.93
DDX49Q9Y6V7 KRT16P4-201ENST00000453883 522 ntBASIC20.84■□□□□ 0.93
DDX49Q9Y6V7 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
DDX49Q9Y6V7 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC20.84■□□□□ 0.93
DDX49Q9Y6V7 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC20.84■□□□□ 0.93
DDX49Q9Y6V7 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
DDX49Q9Y6V7 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC20.84■□□□□ 0.93
DDX49Q9Y6V7 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC20.84■□□□□ 0.93
DDX49Q9Y6V7 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC20.84■□□□□ 0.93
DDX49Q9Y6V7 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
DDX49Q9Y6V7 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
DDX49Q9Y6V7 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC20.84■□□□□ 0.93
DDX49Q9Y6V7 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC20.84■□□□□ 0.93
DDX49Q9Y6V7 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC20.84■□□□□ 0.93
DDX49Q9Y6V7 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
DDX49Q9Y6V7 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC20.84■□□□□ 0.93
DDX49Q9Y6V7 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
DDX49Q9Y6V7 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC20.83■□□□□ 0.93
DDX49Q9Y6V7 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
DDX49Q9Y6V7 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC20.83■□□□□ 0.93
DDX49Q9Y6V7 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC20.83■□□□□ 0.93
DDX49Q9Y6V7 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
DDX49Q9Y6V7 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
DDX49Q9Y6V7 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
DDX49Q9Y6V7 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
DDX49Q9Y6V7 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC20.83■□□□□ 0.93
DDX49Q9Y6V7 MIR149-201ENST00000384879 89 ntBASIC20.83■□□□□ 0.93
DDX49Q9Y6V7 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
DDX49Q9Y6V7 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
DDX49Q9Y6V7 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC20.83■□□□□ 0.93
DDX49Q9Y6V7 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC20.83■□□□□ 0.93
DDX49Q9Y6V7 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
DDX49Q9Y6V7 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
DDX49Q9Y6V7 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.93
DDX49Q9Y6V7 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.92
DDX49Q9Y6V7 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
DDX49Q9Y6V7 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC20.83■□□□□ 0.92
DDX49Q9Y6V7 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
DDX49Q9Y6V7 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
DDX49Q9Y6V7 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC20.83■□□□□ 0.92
DDX49Q9Y6V7 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
DDX49Q9Y6V7 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC20.83■□□□□ 0.92
DDX49Q9Y6V7 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC20.83■□□□□ 0.92
DDX49Q9Y6V7 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
DDX49Q9Y6V7 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.92
DDX49Q9Y6V7 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
DDX49Q9Y6V7 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
DDX49Q9Y6V7 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
DDX49Q9Y6V7 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
DDX49Q9Y6V7 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC20.82■□□□□ 0.92
DDX49Q9Y6V7 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
DDX49Q9Y6V7 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC20.82■□□□□ 0.92
DDX49Q9Y6V7 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
DDX49Q9Y6V7 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
DDX49Q9Y6V7 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
DDX49Q9Y6V7 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
DDX49Q9Y6V7 HES2-202ENST00000377836 507 ntTSL 2 BASIC20.82■□□□□ 0.92
DDX49Q9Y6V7 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
DDX49Q9Y6V7 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC20.82■□□□□ 0.92
DDX49Q9Y6V7 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
DDX49Q9Y6V7 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
DDX49Q9Y6V7 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
DDX49Q9Y6V7 PPOX-214ENST00000535223 664 ntTSL 3 BASIC20.82■□□□□ 0.92
DDX49Q9Y6V7 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC20.82■□□□□ 0.92
DDX49Q9Y6V7 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC20.82■□□□□ 0.92
DDX49Q9Y6V7 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC20.82■□□□□ 0.92
DDX49Q9Y6V7 AL121772.3-201ENST00000610840 674 ntBASIC20.82■□□□□ 0.92
DDX49Q9Y6V7 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC20.82■□□□□ 0.92
DDX49Q9Y6V7 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 47.7 ms