Protein–RNA interactions for Protein: Q9Y5G7

PCDHGA6, Protocadherin gamma-A6, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA6Q9Y5G7 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
PCDHGA6Q9Y5G7 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
PCDHGA6Q9Y5G7 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
PCDHGA6Q9Y5G7 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
PCDHGA6Q9Y5G7 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
PCDHGA6Q9Y5G7 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
PCDHGA6Q9Y5G7 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
PCDHGA6Q9Y5G7 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
PCDHGA6Q9Y5G7 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
PCDHGA6Q9Y5G7 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
PCDHGA6Q9Y5G7 INIP-202ENST00000374236 874 ntTSL 2 BASIC16.72■□□□□ 0.27
PCDHGA6Q9Y5G7 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
PCDHGA6Q9Y5G7 AC096633.1-201ENST00000422446 749 ntBASIC16.72■□□□□ 0.27
PCDHGA6Q9Y5G7 AC007967.3-201ENST00000434308 558 ntBASIC16.72■□□□□ 0.27
PCDHGA6Q9Y5G7 AL591424.1-201ENST00000442569 1213 ntBASIC16.72■□□□□ 0.27
PCDHGA6Q9Y5G7 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC16.72■□□□□ 0.27
PCDHGA6Q9Y5G7 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC16.72■□□□□ 0.27
PCDHGA6Q9Y5G7 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC16.72■□□□□ 0.27
PCDHGA6Q9Y5G7 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
PCDHGA6Q9Y5G7 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC16.72■□□□□ 0.27
PCDHGA6Q9Y5G7 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
PCDHGA6Q9Y5G7 NKAPP1-205ENST00000585790 367 ntBASIC16.72■□□□□ 0.27
PCDHGA6Q9Y5G7 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
PCDHGA6Q9Y5G7 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC16.72■□□□□ 0.27
PCDHGA6Q9Y5G7 AC027601.4-201ENST00000611259 610 ntBASIC16.72■□□□□ 0.27
PCDHGA6Q9Y5G7 AC107918.4-202ENST00000641623 219 ntBASIC16.72■□□□□ 0.27
PCDHGA6Q9Y5G7 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC16.72■□□□□ 0.27
PCDHGA6Q9Y5G7 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC16.72■□□□□ 0.27
PCDHGA6Q9Y5G7 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
PCDHGA6Q9Y5G7 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC16.72■□□□□ 0.27
PCDHGA6Q9Y5G7 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
PCDHGA6Q9Y5G7 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
PCDHGA6Q9Y5G7 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC16.72■□□□□ 0.27
PCDHGA6Q9Y5G7 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
PCDHGA6Q9Y5G7 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
PCDHGA6Q9Y5G7 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
PCDHGA6Q9Y5G7 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
PCDHGA6Q9Y5G7 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
PCDHGA6Q9Y5G7 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC16.72■□□□□ 0.27
PCDHGA6Q9Y5G7 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC16.72■□□□□ 0.27
PCDHGA6Q9Y5G7 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC16.72■□□□□ 0.27
PCDHGA6Q9Y5G7 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
PCDHGA6Q9Y5G7 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
PCDHGA6Q9Y5G7 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
PCDHGA6Q9Y5G7 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
PCDHGA6Q9Y5G7 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
PCDHGA6Q9Y5G7 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC16.71■□□□□ 0.27
PCDHGA6Q9Y5G7 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
PCDHGA6Q9Y5G7 AC104109.2-201ENST00000602919 1418 ntBASIC16.71■□□□□ 0.27
PCDHGA6Q9Y5G7 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
PCDHGA6Q9Y5G7 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
PCDHGA6Q9Y5G7 AP001094.4-201ENST00000579008 2176 ntBASIC16.71■□□□□ 0.27
PCDHGA6Q9Y5G7 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
PCDHGA6Q9Y5G7 AL023806.1-201ENST00000603994 1649 ntBASIC16.71■□□□□ 0.27
PCDHGA6Q9Y5G7 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
PCDHGA6Q9Y5G7 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
PCDHGA6Q9Y5G7 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
PCDHGA6Q9Y5G7 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
PCDHGA6Q9Y5G7 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
PCDHGA6Q9Y5G7 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
PCDHGA6Q9Y5G7 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
PCDHGA6Q9Y5G7 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC16.71■□□□□ 0.27
PCDHGA6Q9Y5G7 LBH-204ENST00000406087 559 ntTSL 4 BASIC16.71■□□□□ 0.27
PCDHGA6Q9Y5G7 AC098831.1-202ENST00000438821 336 ntBASIC16.71■□□□□ 0.27
PCDHGA6Q9Y5G7 AC122714.2-201ENST00000502787 707 ntBASIC16.71■□□□□ 0.27
PCDHGA6Q9Y5G7 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC16.71■□□□□ 0.27
PCDHGA6Q9Y5G7 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC16.71■□□□□ 0.27
PCDHGA6Q9Y5G7 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC16.71■□□□□ 0.27
PCDHGA6Q9Y5G7 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC16.71■□□□□ 0.27
PCDHGA6Q9Y5G7 MTDHP4-201ENST00000600287 670 ntBASIC16.71■□□□□ 0.27
PCDHGA6Q9Y5G7 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC16.71■□□□□ 0.27
PCDHGA6Q9Y5G7 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
PCDHGA6Q9Y5G7 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
PCDHGA6Q9Y5G7 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC16.71■□□□□ 0.27
PCDHGA6Q9Y5G7 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
PCDHGA6Q9Y5G7 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
PCDHGA6Q9Y5G7 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
PCDHGA6Q9Y5G7 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
PCDHGA6Q9Y5G7 AC132938.6-201ENST00000623828 1655 ntBASIC16.71■□□□□ 0.27
PCDHGA6Q9Y5G7 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
PCDHGA6Q9Y5G7 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
PCDHGA6Q9Y5G7 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
PCDHGA6Q9Y5G7 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.26
PCDHGA6Q9Y5G7 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC16.71■□□□□ 0.26
PCDHGA6Q9Y5G7 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC16.71■□□□□ 0.26
PCDHGA6Q9Y5G7 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
PCDHGA6Q9Y5G7 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC16.7■□□□□ 0.26
PCDHGA6Q9Y5G7 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC16.7■□□□□ 0.26
PCDHGA6Q9Y5G7 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
PCDHGA6Q9Y5G7 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
PCDHGA6Q9Y5G7 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
PCDHGA6Q9Y5G7 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
PCDHGA6Q9Y5G7 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC16.7■□□□□ 0.26
PCDHGA6Q9Y5G7 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC16.7■□□□□ 0.26
PCDHGA6Q9Y5G7 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
PCDHGA6Q9Y5G7 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
PCDHGA6Q9Y5G7 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
PCDHGA6Q9Y5G7 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC16.7■□□□□ 0.26
PCDHGA6Q9Y5G7 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC16.7■□□□□ 0.26
PCDHGA6Q9Y5G7 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC16.7■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms