Protein–RNA interactions for Protein: Q9Y5B0

CTDP1, RNA polymerase II subunit A C-terminal domain phosphatase, humanhuman

Predicted RBP Predictions only

Length 961 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1Q9Y5B0 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
CTDP1Q9Y5B0 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
CTDP1Q9Y5B0 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC19.99■□□□□ 0.79
CTDP1Q9Y5B0 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
CTDP1Q9Y5B0 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
CTDP1Q9Y5B0 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC19.99■□□□□ 0.79
CTDP1Q9Y5B0 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
CTDP1Q9Y5B0 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC19.99■□□□□ 0.79
CTDP1Q9Y5B0 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
CTDP1Q9Y5B0 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CTDP1Q9Y5B0 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
CTDP1Q9Y5B0 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC19.99■□□□□ 0.79
CTDP1Q9Y5B0 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC19.99■□□□□ 0.79
CTDP1Q9Y5B0 AC211486.1-202ENST00000416371 468 ntBASIC19.99■□□□□ 0.79
CTDP1Q9Y5B0 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC19.99■□□□□ 0.79
CTDP1Q9Y5B0 AC211476.1-201ENST00000503899 468 ntBASIC19.99■□□□□ 0.79
CTDP1Q9Y5B0 COX5A-206ENST00000568783 571 ntTSL 3 BASIC19.99■□□□□ 0.79
CTDP1Q9Y5B0 AC005829.1-201ENST00000570002 483 ntBASIC19.99■□□□□ 0.79
CTDP1Q9Y5B0 LINC01451-201ENST00000623792 534 ntBASIC19.99■□□□□ 0.79
CTDP1Q9Y5B0 AC134684.3-201ENST00000641758 218 ntBASIC19.99■□□□□ 0.79
CTDP1Q9Y5B0 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC19.99■□□□□ 0.79
CTDP1Q9Y5B0 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC19.99■□□□□ 0.79
CTDP1Q9Y5B0 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
CTDP1Q9Y5B0 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
CTDP1Q9Y5B0 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC19.99■□□□□ 0.79
CTDP1Q9Y5B0 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
CTDP1Q9Y5B0 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CTDP1Q9Y5B0 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
CTDP1Q9Y5B0 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC19.99■□□□□ 0.79
CTDP1Q9Y5B0 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
CTDP1Q9Y5B0 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CTDP1Q9Y5B0 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
CTDP1Q9Y5B0 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC19.98■□□□□ 0.79
CTDP1Q9Y5B0 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CTDP1Q9Y5B0 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC19.98■□□□□ 0.79
CTDP1Q9Y5B0 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC19.98■□□□□ 0.79
CTDP1Q9Y5B0 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CTDP1Q9Y5B0 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
CTDP1Q9Y5B0 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CTDP1Q9Y5B0 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC19.98■□□□□ 0.79
CTDP1Q9Y5B0 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
CTDP1Q9Y5B0 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CTDP1Q9Y5B0 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CTDP1Q9Y5B0 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CTDP1Q9Y5B0 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
CTDP1Q9Y5B0 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC19.98■□□□□ 0.79
CTDP1Q9Y5B0 MCCD1P2-201ENST00000423228 335 ntBASIC19.98■□□□□ 0.79
CTDP1Q9Y5B0 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC19.98■□□□□ 0.79
CTDP1Q9Y5B0 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC19.98■□□□□ 0.79
CTDP1Q9Y5B0 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC19.98■□□□□ 0.79
CTDP1Q9Y5B0 AC092865.6-201ENST00000642101 219 ntBASIC19.98■□□□□ 0.79
CTDP1Q9Y5B0 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
CTDP1Q9Y5B0 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
CTDP1Q9Y5B0 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC19.98■□□□□ 0.79
CTDP1Q9Y5B0 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CTDP1Q9Y5B0 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC19.98■□□□□ 0.79
CTDP1Q9Y5B0 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC19.98■□□□□ 0.79
CTDP1Q9Y5B0 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC19.98■□□□□ 0.79
CTDP1Q9Y5B0 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC19.98■□□□□ 0.79
CTDP1Q9Y5B0 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC19.98■□□□□ 0.79
CTDP1Q9Y5B0 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC19.97■□□□□ 0.79
CTDP1Q9Y5B0 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC19.97■□□□□ 0.79
CTDP1Q9Y5B0 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CTDP1Q9Y5B0 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC19.97■□□□□ 0.79
CTDP1Q9Y5B0 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
CTDP1Q9Y5B0 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CTDP1Q9Y5B0 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
CTDP1Q9Y5B0 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
CTDP1Q9Y5B0 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CTDP1Q9Y5B0 RIN3-211ENST00000557762 517 ntTSL 3 BASIC19.97■□□□□ 0.79
CTDP1Q9Y5B0 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CTDP1Q9Y5B0 AL139327.4-201ENST00000612362 153 ntBASIC19.97■□□□□ 0.79
CTDP1Q9Y5B0 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CTDP1Q9Y5B0 REXO1L11P-201ENST00000620964 1927 ntBASIC19.97■□□□□ 0.79
CTDP1Q9Y5B0 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
CTDP1Q9Y5B0 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
CTDP1Q9Y5B0 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
CTDP1Q9Y5B0 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC19.97■□□□□ 0.79
CTDP1Q9Y5B0 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
CTDP1Q9Y5B0 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
CTDP1Q9Y5B0 BCAR1-209ENST00000546196 1340 ntBASIC19.97■□□□□ 0.79
CTDP1Q9Y5B0 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
CTDP1Q9Y5B0 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
CTDP1Q9Y5B0 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
CTDP1Q9Y5B0 AL135999.2-201ENST00000622438 1686 ntBASIC19.97■□□□□ 0.79
CTDP1Q9Y5B0 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CTDP1Q9Y5B0 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
CTDP1Q9Y5B0 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
CTDP1Q9Y5B0 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CTDP1Q9Y5B0 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CTDP1Q9Y5B0 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
CTDP1Q9Y5B0 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC19.96■□□□□ 0.79
CTDP1Q9Y5B0 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
CTDP1Q9Y5B0 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC19.96■□□□□ 0.79
CTDP1Q9Y5B0 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC19.96■□□□□ 0.79
CTDP1Q9Y5B0 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC19.96■□□□□ 0.79
CTDP1Q9Y5B0 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC19.96■□□□□ 0.79
CTDP1Q9Y5B0 AP001160.2-201ENST00000596071 487 ntBASIC19.96■□□□□ 0.79
CTDP1Q9Y5B0 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
CTDP1Q9Y5B0 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 54.3 ms