Protein–RNA interactions for Protein: Q9NPP4

NLRC4, NLR family CARD domain-containing protein 4, humanhuman

Predictions only

Length 1,024 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NLRC4Q9NPP4 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
NLRC4Q9NPP4 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
NLRC4Q9NPP4 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
NLRC4Q9NPP4 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
NLRC4Q9NPP4 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
NLRC4Q9NPP4 AC105020.1-201ENST00000435356 2205 ntBASIC18.8■□□□□ 0.6
NLRC4Q9NPP4 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
NLRC4Q9NPP4 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
NLRC4Q9NPP4 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC18.8■□□□□ 0.6
NLRC4Q9NPP4 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC18.8■□□□□ 0.6
NLRC4Q9NPP4 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC18.8■□□□□ 0.6
NLRC4Q9NPP4 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
NLRC4Q9NPP4 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC18.8■□□□□ 0.6
NLRC4Q9NPP4 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC18.8■□□□□ 0.6
NLRC4Q9NPP4 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC18.8■□□□□ 0.6
NLRC4Q9NPP4 BX276092.5-203ENST00000456199 560 ntBASIC18.8■□□□□ 0.6
NLRC4Q9NPP4 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC18.8■□□□□ 0.6
NLRC4Q9NPP4 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
NLRC4Q9NPP4 AP005901.3-202ENST00000581653 237 ntBASIC18.8■□□□□ 0.6
NLRC4Q9NPP4 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC18.8■□□□□ 0.6
NLRC4Q9NPP4 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
NLRC4Q9NPP4 AL121956.5-201ENST00000625261 221 ntBASIC18.8■□□□□ 0.6
NLRC4Q9NPP4 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
NLRC4Q9NPP4 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
NLRC4Q9NPP4 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC18.8■□□□□ 0.6
NLRC4Q9NPP4 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC18.8■□□□□ 0.6
NLRC4Q9NPP4 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
NLRC4Q9NPP4 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC18.8■□□□□ 0.6
NLRC4Q9NPP4 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC18.8■□□□□ 0.6
NLRC4Q9NPP4 AC016734.2-201ENST00000624325 1377 ntBASIC18.8■□□□□ 0.6
NLRC4Q9NPP4 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
NLRC4Q9NPP4 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
NLRC4Q9NPP4 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC18.79■□□□□ 0.6
NLRC4Q9NPP4 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
NLRC4Q9NPP4 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
NLRC4Q9NPP4 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
NLRC4Q9NPP4 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
NLRC4Q9NPP4 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC18.79■□□□□ 0.6
NLRC4Q9NPP4 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
NLRC4Q9NPP4 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
NLRC4Q9NPP4 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
NLRC4Q9NPP4 AC103564.2-201ENST00000432853 1299 ntBASIC18.79■□□□□ 0.6
NLRC4Q9NPP4 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
NLRC4Q9NPP4 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC18.79■□□□□ 0.6
NLRC4Q9NPP4 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC18.79■□□□□ 0.6
NLRC4Q9NPP4 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC18.79■□□□□ 0.6
NLRC4Q9NPP4 AL049597.2-201ENST00000565575 961 ntBASIC18.79■□□□□ 0.6
NLRC4Q9NPP4 AC111152.3-201ENST00000569699 673 ntBASIC18.79■□□□□ 0.6
NLRC4Q9NPP4 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC18.79■□□□□ 0.6
NLRC4Q9NPP4 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC18.79■□□□□ 0.6
NLRC4Q9NPP4 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
NLRC4Q9NPP4 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC18.79■□□□□ 0.6
NLRC4Q9NPP4 CROCCP1-201ENST00000426910 5675 ntBASIC18.79■□□□□ 0.6
NLRC4Q9NPP4 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
NLRC4Q9NPP4 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC18.79■□□□□ 0.6
NLRC4Q9NPP4 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
NLRC4Q9NPP4 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
NLRC4Q9NPP4 FLJ38576-201ENST00000623820 2459 ntBASIC18.79■□□□□ 0.6
NLRC4Q9NPP4 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC18.79■□□□□ 0.6
NLRC4Q9NPP4 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
NLRC4Q9NPP4 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
NLRC4Q9NPP4 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
NLRC4Q9NPP4 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC18.78■□□□□ 0.6
NLRC4Q9NPP4 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
NLRC4Q9NPP4 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
NLRC4Q9NPP4 AC079328.2-201ENST00000561241 3354 ntBASIC18.78■□□□□ 0.6
NLRC4Q9NPP4 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC18.78■□□□□ 0.6
NLRC4Q9NPP4 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
NLRC4Q9NPP4 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
NLRC4Q9NPP4 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
NLRC4Q9NPP4 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
NLRC4Q9NPP4 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
NLRC4Q9NPP4 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
NLRC4Q9NPP4 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
NLRC4Q9NPP4 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
NLRC4Q9NPP4 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
NLRC4Q9NPP4 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
NLRC4Q9NPP4 CHCHD2P8-201ENST00000429873 447 ntBASIC18.78■□□□□ 0.6
NLRC4Q9NPP4 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
NLRC4Q9NPP4 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC18.78■□□□□ 0.6
NLRC4Q9NPP4 FAM86EP-206ENST00000510506 987 ntBASIC18.78■□□□□ 0.6
NLRC4Q9NPP4 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC18.78■□□□□ 0.6
NLRC4Q9NPP4 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC18.78■□□□□ 0.6
NLRC4Q9NPP4 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC18.78■□□□□ 0.6
NLRC4Q9NPP4 AL121672.3-201ENST00000608644 468 ntBASIC18.78■□□□□ 0.6
NLRC4Q9NPP4 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
NLRC4Q9NPP4 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
NLRC4Q9NPP4 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
NLRC4Q9NPP4 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
NLRC4Q9NPP4 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
NLRC4Q9NPP4 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC18.78■□□□□ 0.6
NLRC4Q9NPP4 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
NLRC4Q9NPP4 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
NLRC4Q9NPP4 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC18.78■□□□□ 0.6
NLRC4Q9NPP4 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
NLRC4Q9NPP4 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
NLRC4Q9NPP4 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
NLRC4Q9NPP4 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC18.78■□□□□ 0.6
NLRC4Q9NPP4 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
NLRC4Q9NPP4 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC18.77■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 65.4 ms