Protein–RNA interactions for Protein: Q92544

TM9SF4, Transmembrane 9 superfamily member 4, humanhuman

Predictions only

Length 642 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4Q92544 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
TM9SF4Q92544 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
TM9SF4Q92544 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
TM9SF4Q92544 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
TM9SF4Q92544 IGHV3-22-201ENST00000520721 359 ntBASIC16.39■□□□□ 0.21
TM9SF4Q92544 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
TM9SF4Q92544 AC008735.5-201ENST00000623544 497 ntBASIC16.39■□□□□ 0.21
TM9SF4Q92544 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC16.39■□□□□ 0.21
TM9SF4Q92544 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC16.39■□□□□ 0.21
TM9SF4Q92544 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC16.39■□□□□ 0.21
TM9SF4Q92544 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
TM9SF4Q92544 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
TM9SF4Q92544 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC16.39■□□□□ 0.21
TM9SF4Q92544 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC16.39■□□□□ 0.21
TM9SF4Q92544 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
TM9SF4Q92544 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC16.39■□□□□ 0.21
TM9SF4Q92544 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
TM9SF4Q92544 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC16.39■□□□□ 0.21
TM9SF4Q92544 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
TM9SF4Q92544 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
TM9SF4Q92544 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
TM9SF4Q92544 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
TM9SF4Q92544 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
TM9SF4Q92544 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
TM9SF4Q92544 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
TM9SF4Q92544 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC16.38■□□□□ 0.21
TM9SF4Q92544 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
TM9SF4Q92544 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
TM9SF4Q92544 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC16.38■□□□□ 0.21
TM9SF4Q92544 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
TM9SF4Q92544 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
TM9SF4Q92544 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
TM9SF4Q92544 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
TM9SF4Q92544 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
TM9SF4Q92544 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
TM9SF4Q92544 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
TM9SF4Q92544 AC022211.2-201ENST00000585075 2527 ntBASIC16.38■□□□□ 0.21
TM9SF4Q92544 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
TM9SF4Q92544 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
TM9SF4Q92544 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
TM9SF4Q92544 CSF3-203ENST00000394148 622 ntTSL 3 BASIC16.38■□□□□ 0.21
TM9SF4Q92544 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
TM9SF4Q92544 LAGE3P1-201ENST00000425356 484 ntBASIC16.38■□□□□ 0.21
TM9SF4Q92544 AC098831.1-202ENST00000438821 336 ntBASIC16.38■□□□□ 0.21
TM9SF4Q92544 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
TM9SF4Q92544 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC16.38■□□□□ 0.21
TM9SF4Q92544 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC16.38■□□□□ 0.21
TM9SF4Q92544 AC105339.3-201ENST00000560043 636 ntBASIC16.38■□□□□ 0.21
TM9SF4Q92544 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC16.38■□□□□ 0.21
TM9SF4Q92544 MTDHP4-201ENST00000600287 670 ntBASIC16.38■□□□□ 0.21
TM9SF4Q92544 Z83851.2-201ENST00000609564 659 ntBASIC16.38■□□□□ 0.21
TM9SF4Q92544 NF2-208ENST00000403435 2568 ntTSL 5 BASIC16.38■□□□□ 0.21
TM9SF4Q92544 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
TM9SF4Q92544 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
TM9SF4Q92544 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
TM9SF4Q92544 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC16.38■□□□□ 0.21
TM9SF4Q92544 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
TM9SF4Q92544 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
TM9SF4Q92544 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC16.38■□□□□ 0.21
TM9SF4Q92544 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
TM9SF4Q92544 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
TM9SF4Q92544 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
TM9SF4Q92544 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC16.37■□□□□ 0.21
TM9SF4Q92544 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC16.37■□□□□ 0.21
TM9SF4Q92544 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
TM9SF4Q92544 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
TM9SF4Q92544 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
TM9SF4Q92544 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
TM9SF4Q92544 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
TM9SF4Q92544 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
TM9SF4Q92544 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
TM9SF4Q92544 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
TM9SF4Q92544 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC16.37■□□□□ 0.21
TM9SF4Q92544 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
TM9SF4Q92544 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC16.37■□□□□ 0.21
TM9SF4Q92544 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
TM9SF4Q92544 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC16.37■□□□□ 0.21
TM9SF4Q92544 AD000864.1-201ENST00000624076 2295 ntBASIC16.37■□□□□ 0.21
TM9SF4Q92544 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC16.37■□□□□ 0.21
TM9SF4Q92544 PHGDH-209ENST00000641074 1780 ntBASIC16.37■□□□□ 0.21
TM9SF4Q92544 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
TM9SF4Q92544 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
TM9SF4Q92544 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
TM9SF4Q92544 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC16.37■□□□□ 0.21
TM9SF4Q92544 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC16.37■□□□□ 0.21
TM9SF4Q92544 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC16.37■□□□□ 0.21
TM9SF4Q92544 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
TM9SF4Q92544 AC025062.2-201ENST00000605477 670 ntBASIC16.37■□□□□ 0.21
TM9SF4Q92544 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
TM9SF4Q92544 AC107918.4-202ENST00000641623 219 ntBASIC16.37■□□□□ 0.21
TM9SF4Q92544 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
TM9SF4Q92544 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
TM9SF4Q92544 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC16.37■□□□□ 0.21
TM9SF4Q92544 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
TM9SF4Q92544 NME9-203ENST00000383180 2133 ntTSL 2 BASIC16.37■□□□□ 0.21
TM9SF4Q92544 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC16.37■□□□□ 0.21
TM9SF4Q92544 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC16.37■□□□□ 0.21
TM9SF4Q92544 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC16.37■□□□□ 0.21
TM9SF4Q92544 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC16.37■□□□□ 0.21
TM9SF4Q92544 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 54.1 ms