Protein–RNA interactions for Protein: Q6P4E1

CASC4, Protein CASC4, humanhuman

Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4Q6P4E1 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC17.72■□□□□ 0.43
CASC4Q6P4E1 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
CASC4Q6P4E1 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC17.72■□□□□ 0.43
CASC4Q6P4E1 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
CASC4Q6P4E1 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CASC4Q6P4E1 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
CASC4Q6P4E1 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CASC4Q6P4E1 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
CASC4Q6P4E1 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
CASC4Q6P4E1 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
CASC4Q6P4E1 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC17.71■□□□□ 0.43
CASC4Q6P4E1 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC17.71■□□□□ 0.43
CASC4Q6P4E1 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC17.71■□□□□ 0.43
CASC4Q6P4E1 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CASC4Q6P4E1 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
CASC4Q6P4E1 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
CASC4Q6P4E1 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CASC4Q6P4E1 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
CASC4Q6P4E1 AC007967.3-201ENST00000434308 558 ntBASIC17.71■□□□□ 0.43
CASC4Q6P4E1 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC17.71■□□□□ 0.43
CASC4Q6P4E1 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC17.71■□□□□ 0.43
CASC4Q6P4E1 TK1-204ENST00000590430 683 ntTSL 3 BASIC17.71■□□□□ 0.43
CASC4Q6P4E1 AC011498.5-201ENST00000592027 486 ntBASIC17.71■□□□□ 0.43
CASC4Q6P4E1 NDUFV2-AS1-203ENST00000608008 779 ntBASIC17.71■□□□□ 0.43
CASC4Q6P4E1 AL592071.1-201ENST00000611956 408 ntBASIC17.71■□□□□ 0.43
CASC4Q6P4E1 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
CASC4Q6P4E1 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CASC4Q6P4E1 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
CASC4Q6P4E1 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CASC4Q6P4E1 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC17.71■□□□□ 0.42
CASC4Q6P4E1 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CASC4Q6P4E1 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC17.7■□□□□ 0.42
CASC4Q6P4E1 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
CASC4Q6P4E1 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
CASC4Q6P4E1 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CASC4Q6P4E1 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC17.7■□□□□ 0.42
CASC4Q6P4E1 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC17.7■□□□□ 0.42
CASC4Q6P4E1 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CASC4Q6P4E1 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CASC4Q6P4E1 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CASC4Q6P4E1 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CASC4Q6P4E1 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC17.7■□□□□ 0.42
CASC4Q6P4E1 DAP-202ENST00000432074 1048 ntTSL 2 BASIC17.7■□□□□ 0.42
CASC4Q6P4E1 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CASC4Q6P4E1 AC109462.3-201ENST00000573934 613 ntBASIC17.7■□□□□ 0.42
CASC4Q6P4E1 AC011840.4-201ENST00000578471 627 ntBASIC17.7■□□□□ 0.42
CASC4Q6P4E1 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC17.7■□□□□ 0.42
CASC4Q6P4E1 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC17.7■□□□□ 0.42
CASC4Q6P4E1 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
CASC4Q6P4E1 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CASC4Q6P4E1 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC17.7■□□□□ 0.42
CASC4Q6P4E1 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC17.7■□□□□ 0.42
CASC4Q6P4E1 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CASC4Q6P4E1 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CASC4Q6P4E1 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
CASC4Q6P4E1 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
CASC4Q6P4E1 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CASC4Q6P4E1 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CASC4Q6P4E1 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CASC4Q6P4E1 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
CASC4Q6P4E1 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC17.69■□□□□ 0.42
CASC4Q6P4E1 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC17.69■□□□□ 0.42
CASC4Q6P4E1 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC17.69■□□□□ 0.42
CASC4Q6P4E1 AC060834.1-201ENST00000443027 2032 ntBASIC17.69■□□□□ 0.42
CASC4Q6P4E1 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CASC4Q6P4E1 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC17.69■□□□□ 0.42
CASC4Q6P4E1 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CASC4Q6P4E1 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
CASC4Q6P4E1 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CASC4Q6P4E1 MYCLP1-201ENST00000372451 1075 ntBASIC17.69■□□□□ 0.42
CASC4Q6P4E1 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC17.69■□□□□ 0.42
CASC4Q6P4E1 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC17.69■□□□□ 0.42
CASC4Q6P4E1 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC17.69■□□□□ 0.42
CASC4Q6P4E1 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC17.69■□□□□ 0.42
CASC4Q6P4E1 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC17.69■□□□□ 0.42
CASC4Q6P4E1 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC17.69■□□□□ 0.42
CASC4Q6P4E1 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
CASC4Q6P4E1 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CASC4Q6P4E1 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CASC4Q6P4E1 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CASC4Q6P4E1 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CASC4Q6P4E1 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC17.69■□□□□ 0.42
CASC4Q6P4E1 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
CASC4Q6P4E1 RCAN3-202ENST00000374395 6802 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CASC4Q6P4E1 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CASC4Q6P4E1 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CASC4Q6P4E1 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
CASC4Q6P4E1 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
CASC4Q6P4E1 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
CASC4Q6P4E1 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CASC4Q6P4E1 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CASC4Q6P4E1 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC17.68■□□□□ 0.42
CASC4Q6P4E1 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CASC4Q6P4E1 AC116353.5-201ENST00000638148 1699 ntBASIC17.68■□□□□ 0.42
CASC4Q6P4E1 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
CASC4Q6P4E1 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC17.68■□□□□ 0.42
CASC4Q6P4E1 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CASC4Q6P4E1 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CASC4Q6P4E1 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
CASC4Q6P4E1 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 40.3 ms