Protein–RNA interactions for Protein: P78426

NKX6-1, Homeobox protein Nkx-6.1, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-1P78426 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
NKX6-1P78426 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC15.31■□□□□ 0.04
NKX6-1P78426 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC15.31■□□□□ 0.04
NKX6-1P78426 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
NKX6-1P78426 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
NKX6-1P78426 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
NKX6-1P78426 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
NKX6-1P78426 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
NKX6-1P78426 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
NKX6-1P78426 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
NKX6-1P78426 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
NKX6-1P78426 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
NKX6-1P78426 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC15.31■□□□□ 0.04
NKX6-1P78426 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
NKX6-1P78426 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
NKX6-1P78426 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC15.31■□□□□ 0.04
NKX6-1P78426 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC15.31■□□□□ 0.04
NKX6-1P78426 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
NKX6-1P78426 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
NKX6-1P78426 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC15.31■□□□□ 0.04
NKX6-1P78426 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
NKX6-1P78426 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
NKX6-1P78426 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
NKX6-1P78426 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC15.3■□□□□ 0.04
NKX6-1P78426 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
NKX6-1P78426 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
NKX6-1P78426 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC15.3■□□□□ 0.04
NKX6-1P78426 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
NKX6-1P78426 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
NKX6-1P78426 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
NKX6-1P78426 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC15.3■□□□□ 0.04
NKX6-1P78426 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
NKX6-1P78426 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC15.3■□□□□ 0.04
NKX6-1P78426 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
NKX6-1P78426 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
NKX6-1P78426 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
NKX6-1P78426 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC15.3■□□□□ 0.04
NKX6-1P78426 CTNS-203ENST00000399306 803 ntTSL 3 BASIC15.3■□□□□ 0.04
NKX6-1P78426 RPSAP43-201ENST00000402237 625 ntBASIC15.3■□□□□ 0.04
NKX6-1P78426 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC15.3■□□□□ 0.04
NKX6-1P78426 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
NKX6-1P78426 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC15.3■□□□□ 0.04
NKX6-1P78426 RPS2P1-201ENST00000434010 821 ntBASIC15.3■□□□□ 0.04
NKX6-1P78426 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC15.3■□□□□ 0.04
NKX6-1P78426 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC15.3■□□□□ 0.04
NKX6-1P78426 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC15.3■□□□□ 0.04
NKX6-1P78426 DNAJB3-201ENST00000446806 729 ntBASIC15.3■□□□□ 0.04
NKX6-1P78426 KRT18P3-201ENST00000451602 1288 ntBASIC15.3■□□□□ 0.04
NKX6-1P78426 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC15.3■□□□□ 0.04
NKX6-1P78426 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
NKX6-1P78426 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
NKX6-1P78426 AC010460.3-201ENST00000511359 1579 ntBASIC15.3■□□□□ 0.04
NKX6-1P78426 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC15.3■□□□□ 0.04
NKX6-1P78426 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC15.3■□□□□ 0.04
NKX6-1P78426 AC021087.4-201ENST00000563761 564 ntBASIC15.3■□□□□ 0.04
NKX6-1P78426 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC15.3■□□□□ 0.04
NKX6-1P78426 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC15.3■□□□□ 0.04
NKX6-1P78426 AC027796.2-201ENST00000575326 344 ntBASIC15.3■□□□□ 0.04
NKX6-1P78426 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC15.3■□□□□ 0.04
NKX6-1P78426 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC15.3■□□□□ 0.04
NKX6-1P78426 MED29-202ENST00000594368 1471 ntTSL 2 BASIC15.3■□□□□ 0.04
NKX6-1P78426 LINC02084-201ENST00000606069 1096 ntBASIC15.3■□□□□ 0.04
NKX6-1P78426 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC15.3■□□□□ 0.04
NKX6-1P78426 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
NKX6-1P78426 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC15.3■□□□□ 0.04
NKX6-1P78426 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
NKX6-1P78426 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC15.3■□□□□ 0.04
NKX6-1P78426 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
NKX6-1P78426 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
NKX6-1P78426 OGFRL1-201ENST00000370435 8391 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
NKX6-1P78426 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC15.3■□□□□ 0.04
NKX6-1P78426 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
NKX6-1P78426 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC15.3■□□□□ 0.04
NKX6-1P78426 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
NKX6-1P78426 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
NKX6-1P78426 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC15.29■□□□□ 0.04
NKX6-1P78426 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
NKX6-1P78426 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
NKX6-1P78426 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC15.29■□□□□ 0.04
NKX6-1P78426 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
NKX6-1P78426 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
NKX6-1P78426 AL354751.1-201ENST00000412768 1863 ntBASIC15.29■□□□□ 0.04
NKX6-1P78426 AC138028.4-201ENST00000564984 1845 ntBASIC15.29■□□□□ 0.04
NKX6-1P78426 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC15.29■□□□□ 0.04
NKX6-1P78426 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
NKX6-1P78426 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
NKX6-1P78426 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
NKX6-1P78426 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
NKX6-1P78426 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
NKX6-1P78426 KRT18P55-202ENST00000578578 1546 ntBASIC15.29■□□□□ 0.04
NKX6-1P78426 ADGRA1-203ENST00000607359 6004 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
NKX6-1P78426 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC15.29■□□□□ 0.04
NKX6-1P78426 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
NKX6-1P78426 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
NKX6-1P78426 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC15.29■□□□□ 0.04
NKX6-1P78426 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
NKX6-1P78426 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
NKX6-1P78426 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC15.29■□□□□ 0.04
NKX6-1P78426 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
NKX6-1P78426 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms