Protein–RNA interactions for Protein: P68366

TUBA4A, Tubulin alpha-4A chain, humanhuman

Predictions only

Length 448 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA4AP68366 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
TUBA4AP68366 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
TUBA4AP68366 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
TUBA4AP68366 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
TUBA4AP68366 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
TUBA4AP68366 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TUBA4AP68366 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TUBA4AP68366 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TUBA4AP68366 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC16.31■□□□□ 0.2
TUBA4AP68366 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC16.31■□□□□ 0.2
TUBA4AP68366 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
TUBA4AP68366 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TUBA4AP68366 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
TUBA4AP68366 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
TUBA4AP68366 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TUBA4AP68366 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TUBA4AP68366 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
TUBA4AP68366 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TUBA4AP68366 UROS-202ENST00000368778 1556 ntTSL 2 BASIC16.3■□□□□ 0.2
TUBA4AP68366 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TUBA4AP68366 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC16.3■□□□□ 0.2
TUBA4AP68366 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TUBA4AP68366 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TUBA4AP68366 HYMAI-201ENST00000635591 3347 ntBASIC16.3■□□□□ 0.2
TUBA4AP68366 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TUBA4AP68366 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TUBA4AP68366 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
TUBA4AP68366 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
TUBA4AP68366 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TUBA4AP68366 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
TUBA4AP68366 ANKRD20A18P-201ENST00000359341 492 ntBASIC16.3■□□□□ 0.2
TUBA4AP68366 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TUBA4AP68366 AK4P3-201ENST00000418260 669 ntBASIC16.3■□□□□ 0.2
TUBA4AP68366 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC16.3■□□□□ 0.2
TUBA4AP68366 YBX1P2-201ENST00000489612 999 ntBASIC16.3■□□□□ 0.2
TUBA4AP68366 WWOX-216ENST00000569818 525 ntBASIC16.3■□□□□ 0.2
TUBA4AP68366 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC16.3■□□□□ 0.2
TUBA4AP68366 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC16.3■□□□□ 0.2
TUBA4AP68366 AC140113.3-201ENST00000605663 199 ntBASIC16.3■□□□□ 0.2
TUBA4AP68366 AC024243.1-201ENST00000609234 778 ntBASIC16.3■□□□□ 0.2
TUBA4AP68366 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
TUBA4AP68366 AC011558.1-201ENST00000623459 338 ntBASIC16.3■□□□□ 0.2
TUBA4AP68366 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
TUBA4AP68366 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
TUBA4AP68366 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TUBA4AP68366 C15orf52-202ENST00000397536 4717 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
TUBA4AP68366 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC16.3■□□□□ 0.2
TUBA4AP68366 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC16.3■□□□□ 0.2
TUBA4AP68366 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC16.3■□□□□ 0.2
TUBA4AP68366 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TUBA4AP68366 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC16.3■□□□□ 0.2
TUBA4AP68366 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC16.3■□□□□ 0.2
TUBA4AP68366 IMPA1-201ENST00000256108 2690 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TUBA4AP68366 AC104640.1-201ENST00000562617 2109 ntBASIC16.3■□□□□ 0.2
TUBA4AP68366 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TUBA4AP68366 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC16.3■□□□□ 0.2
TUBA4AP68366 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TUBA4AP68366 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TUBA4AP68366 FRMPD4-201ENST00000380682 8465 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
TUBA4AP68366 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
TUBA4AP68366 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
TUBA4AP68366 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TUBA4AP68366 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
TUBA4AP68366 RHBDF1P1-201ENST00000427504 1941 ntBASIC16.29■□□□□ 0.2
TUBA4AP68366 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
TUBA4AP68366 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC16.29■□□□□ 0.2
TUBA4AP68366 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
TUBA4AP68366 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
TUBA4AP68366 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
TUBA4AP68366 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC16.29■□□□□ 0.2
TUBA4AP68366 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
TUBA4AP68366 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TUBA4AP68366 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC16.29■□□□□ 0.2
TUBA4AP68366 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
TUBA4AP68366 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
TUBA4AP68366 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TUBA4AP68366 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC16.29■□□□□ 0.2
TUBA4AP68366 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
TUBA4AP68366 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
TUBA4AP68366 MIR564-202ENST00000385049 94 ntBASIC16.29■□□□□ 0.2
TUBA4AP68366 KIRREL3-AS3-201ENST00000404882 831 ntBASIC16.29■□□□□ 0.2
TUBA4AP68366 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
TUBA4AP68366 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
TUBA4AP68366 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC16.29■□□□□ 0.2
TUBA4AP68366 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
TUBA4AP68366 AL441883.1-201ENST00000566170 1045 ntBASIC16.29■□□□□ 0.2
TUBA4AP68366 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC16.29■□□□□ 0.2
TUBA4AP68366 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
TUBA4AP68366 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC16.29■□□□□ 0.2
TUBA4AP68366 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
TUBA4AP68366 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC16.29■□□□□ 0.2
TUBA4AP68366 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
TUBA4AP68366 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
TUBA4AP68366 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
TUBA4AP68366 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
TUBA4AP68366 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC16.29■□□□□ 0.2
TUBA4AP68366 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
TUBA4AP68366 AC009102.3-201ENST00000623118 1491 ntBASIC16.29■□□□□ 0.2
TUBA4AP68366 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TUBA4AP68366 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 33.9 ms