Protein–RNA interactions for Protein: P57729

RAB38, Ras-related protein Rab-38, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB38P57729 AC008735.5-201ENST00000623544 497 ntBASIC16.28■□□□□ 0.2
RAB38P57729 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC16.28■□□□□ 0.2
RAB38P57729 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RAB38P57729 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RAB38P57729 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC16.28■□□□□ 0.2
RAB38P57729 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
RAB38P57729 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
RAB38P57729 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC16.28■□□□□ 0.2
RAB38P57729 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RAB38P57729 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC16.28■□□□□ 0.2
RAB38P57729 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RAB38P57729 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC16.28■□□□□ 0.2
RAB38P57729 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC16.28■□□□□ 0.2
RAB38P57729 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RAB38P57729 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RAB38P57729 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
RAB38P57729 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC16.27■□□□□ 0.2
RAB38P57729 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
RAB38P57729 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
RAB38P57729 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
RAB38P57729 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
RAB38P57729 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
RAB38P57729 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
RAB38P57729 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
RAB38P57729 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
RAB38P57729 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
RAB38P57729 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
RAB38P57729 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
RAB38P57729 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
RAB38P57729 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC16.27■□□□□ 0.2
RAB38P57729 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
RAB38P57729 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
RAB38P57729 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
RAB38P57729 KLK8-205ENST00000593490 267 ntTSL 3 BASIC16.27■□□□□ 0.2
RAB38P57729 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC16.27■□□□□ 0.2
RAB38P57729 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC16.27■□□□□ 0.2
RAB38P57729 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC16.27■□□□□ 0.2
RAB38P57729 FAM215A-202ENST00000632077 792 ntBASIC16.27■□□□□ 0.2
RAB38P57729 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
RAB38P57729 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC16.27■□□□□ 0.2
RAB38P57729 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC16.27■□□□□ 0.19
RAB38P57729 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC16.27■□□□□ 0.19
RAB38P57729 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.19
RAB38P57729 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC16.27■□□□□ 0.19
RAB38P57729 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
RAB38P57729 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC16.27■□□□□ 0.19
RAB38P57729 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
RAB38P57729 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
RAB38P57729 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
RAB38P57729 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
RAB38P57729 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
RAB38P57729 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
RAB38P57729 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
RAB38P57729 EGFEM1P-202ENST00000431685 1563 ntBASIC16.26■□□□□ 0.19
RAB38P57729 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
RAB38P57729 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
RAB38P57729 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC16.26■□□□□ 0.19
RAB38P57729 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC16.26■□□□□ 0.19
RAB38P57729 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC16.26■□□□□ 0.19
RAB38P57729 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC16.26■□□□□ 0.19
RAB38P57729 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
RAB38P57729 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
RAB38P57729 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
RAB38P57729 INIP-202ENST00000374236 874 ntTSL 2 BASIC16.26■□□□□ 0.19
RAB38P57729 NABP1-203ENST00000409510 843 ntTSL 5 BASIC16.26■□□□□ 0.19
RAB38P57729 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
RAB38P57729 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC16.26■□□□□ 0.19
RAB38P57729 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC16.26■□□□□ 0.19
RAB38P57729 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC16.26■□□□□ 0.19
RAB38P57729 AP001005.1-201ENST00000571755 1248 ntBASIC16.26■□□□□ 0.19
RAB38P57729 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC16.26■□□□□ 0.19
RAB38P57729 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC16.26■□□□□ 0.19
RAB38P57729 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC16.26■□□□□ 0.19
RAB38P57729 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
RAB38P57729 GPR89P-201ENST00000407924 1495 ntBASIC16.26■□□□□ 0.19
RAB38P57729 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
RAB38P57729 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
RAB38P57729 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
RAB38P57729 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC16.26■□□□□ 0.19
RAB38P57729 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
RAB38P57729 PKD1P1-201ENST00000458669 6805 ntBASIC16.26■□□□□ 0.19
RAB38P57729 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
RAB38P57729 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
RAB38P57729 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
RAB38P57729 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC16.25■□□□□ 0.19
RAB38P57729 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
RAB38P57729 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC16.25■□□□□ 0.19
RAB38P57729 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
RAB38P57729 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
RAB38P57729 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC16.25■□□□□ 0.19
RAB38P57729 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
RAB38P57729 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC16.25■□□□□ 0.19
RAB38P57729 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
RAB38P57729 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC16.25■□□□□ 0.19
RAB38P57729 AL590787.1-201ENST00000568856 1315 ntBASIC16.25■□□□□ 0.19
RAB38P57729 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
RAB38P57729 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC16.25■□□□□ 0.19
RAB38P57729 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
RAB38P57729 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC16.25■□□□□ 0.19
RAB38P57729 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms