Protein–RNA interactions for Protein: P57055

RIPPLY3, Protein ripply3, humanhuman

Predictions only

Length 190 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIPPLY3P57055 LBX2-AS1-202ENST00000603175 2083 ntBASIC14.35□□□□□ -0.11
RIPPLY3P57055 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
RIPPLY3P57055 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
RIPPLY3P57055 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
RIPPLY3P57055 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
RIPPLY3P57055 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC14.35□□□□□ -0.11
RIPPLY3P57055 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC14.35□□□□□ -0.11
RIPPLY3P57055 AC034236.2-201ENST00000606662 1610 ntBASIC14.35□□□□□ -0.11
RIPPLY3P57055 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
RIPPLY3P57055 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
RIPPLY3P57055 NGF-201ENST00000369512 1047 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
RIPPLY3P57055 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
RIPPLY3P57055 COPS6-202ENST00000418625 1107 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
RIPPLY3P57055 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC14.35□□□□□ -0.11
RIPPLY3P57055 SPDYE7P-202ENST00000420373 878 ntBASIC14.35□□□□□ -0.11
RIPPLY3P57055 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
RIPPLY3P57055 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
RIPPLY3P57055 IQCF3-202ENST00000440739 505 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
RIPPLY3P57055 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
RIPPLY3P57055 ARTN-206ENST00000472435 402 ntTSL 3 BASIC14.35□□□□□ -0.11
RIPPLY3P57055 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
RIPPLY3P57055 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC14.35□□□□□ -0.11
RIPPLY3P57055 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
RIPPLY3P57055 STARD4-205ENST00000505803 803 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
RIPPLY3P57055 STARD4-207ENST00000509887 1186 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
RIPPLY3P57055 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC14.35□□□□□ -0.11
RIPPLY3P57055 RHOQP1-201ENST00000555758 579 ntBASIC14.35□□□□□ -0.11
RIPPLY3P57055 AP005482.1-201ENST00000563722 1273 ntBASIC14.35□□□□□ -0.11
RIPPLY3P57055 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
RIPPLY3P57055 RN7SL219P-201ENST00000582872 296 ntBASIC14.35□□□□□ -0.11
RIPPLY3P57055 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
RIPPLY3P57055 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC14.35□□□□□ -0.11
RIPPLY3P57055 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
RIPPLY3P57055 AC026740.1-201ENST00000607068 791 ntBASIC14.35□□□□□ -0.11
RIPPLY3P57055 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC14.35□□□□□ -0.11
RIPPLY3P57055 SNX1-214ENST00000625244 324 ntTSL 5 BASIC14.35□□□□□ -0.11
RIPPLY3P57055 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
RIPPLY3P57055 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC14.35□□□□□ -0.11
RIPPLY3P57055 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
RIPPLY3P57055 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC14.35□□□□□ -0.11
RIPPLY3P57055 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
RIPPLY3P57055 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
RIPPLY3P57055 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
RIPPLY3P57055 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
RIPPLY3P57055 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
RIPPLY3P57055 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC14.35□□□□□ -0.11
RIPPLY3P57055 AL049812.1-201ENST00000432563 2267 ntBASIC14.35□□□□□ -0.11
RIPPLY3P57055 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
RIPPLY3P57055 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
RIPPLY3P57055 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
RIPPLY3P57055 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC14.35□□□□□ -0.11
RIPPLY3P57055 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
RIPPLY3P57055 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
RIPPLY3P57055 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
RIPPLY3P57055 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC14.34□□□□□ -0.11
RIPPLY3P57055 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
RIPPLY3P57055 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
RIPPLY3P57055 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
RIPPLY3P57055 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
RIPPLY3P57055 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC14.34□□□□□ -0.11
RIPPLY3P57055 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
RIPPLY3P57055 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC14.34□□□□□ -0.11
RIPPLY3P57055 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
RIPPLY3P57055 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC14.34□□□□□ -0.11
RIPPLY3P57055 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
RIPPLY3P57055 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
RIPPLY3P57055 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC14.34□□□□□ -0.11
RIPPLY3P57055 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC14.34□□□□□ -0.11
RIPPLY3P57055 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
RIPPLY3P57055 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
RIPPLY3P57055 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC14.34□□□□□ -0.11
RIPPLY3P57055 MXI1-205ENST00000393134 889 ntTSL 2 BASIC14.34□□□□□ -0.11
RIPPLY3P57055 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC14.34□□□□□ -0.11
RIPPLY3P57055 AC241585.1-201ENST00000433527 519 ntBASIC14.34□□□□□ -0.11
RIPPLY3P57055 ACTBP11-201ENST00000436287 1126 ntBASIC14.34□□□□□ -0.11
RIPPLY3P57055 INE1-201ENST00000456273 945 ntBASIC14.34□□□□□ -0.11
RIPPLY3P57055 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC14.34□□□□□ -0.11
RIPPLY3P57055 AC011495.1-201ENST00000498085 584 ntBASIC14.34□□□□□ -0.11
RIPPLY3P57055 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC14.34□□□□□ -0.11
RIPPLY3P57055 FOS-206ENST00000555347 1280 ntTSL 2 BASIC14.34□□□□□ -0.11
RIPPLY3P57055 CYB561-216ENST00000582297 897 ntTSL 3 BASIC14.34□□□□□ -0.11
RIPPLY3P57055 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC14.34□□□□□ -0.11
RIPPLY3P57055 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
RIPPLY3P57055 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC14.34□□□□□ -0.11
RIPPLY3P57055 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
RIPPLY3P57055 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
RIPPLY3P57055 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC14.34□□□□□ -0.11
RIPPLY3P57055 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
RIPPLY3P57055 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
RIPPLY3P57055 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
RIPPLY3P57055 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
RIPPLY3P57055 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
RIPPLY3P57055 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
RIPPLY3P57055 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
RIPPLY3P57055 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
RIPPLY3P57055 ADAMTS18-201ENST00000282849 5913 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
RIPPLY3P57055 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
RIPPLY3P57055 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
RIPPLY3P57055 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
RIPPLY3P57055 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC14.34□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 27.3 ms