Protein–RNA interactions for Protein: P51587

BRCA2, Breast cancer type 2 susceptibility protein, humanhuman

Predictions only

Length 3,418 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2P51587 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
BRCA2P51587 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC19.15■□□□□ 0.66
BRCA2P51587 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
BRCA2P51587 GLI4-203ENST00000517468 963 ntTSL 5 BASIC19.15■□□□□ 0.66
BRCA2P51587 MRPL52-216ENST00000557221 922 ntTSL 2 BASIC19.15■□□□□ 0.66
BRCA2P51587 AC046168.2-201ENST00000560590 875 ntTSL 3 BASIC19.15■□□□□ 0.66
BRCA2P51587 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.66
BRCA2P51587 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
BRCA2P51587 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC19.14■□□□□ 0.66
BRCA2P51587 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
BRCA2P51587 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC19.14■□□□□ 0.66
BRCA2P51587 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
BRCA2P51587 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
BRCA2P51587 MAGEC1-202ENST00000406005 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
BRCA2P51587 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC19.14■□□□□ 0.65
BRCA2P51587 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC19.14■□□□□ 0.65
BRCA2P51587 AC140912.1-201ENST00000577171 1054 ntBASIC19.14■□□□□ 0.65
BRCA2P51587 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
BRCA2P51587 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
BRCA2P51587 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
BRCA2P51587 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC19.14■□□□□ 0.65
BRCA2P51587 AC073592.3-201ENST00000625118 1834 ntBASIC19.14■□□□□ 0.65
BRCA2P51587 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
BRCA2P51587 DPF3-210ENST00000556509 1138 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
BRCA2P51587 ARL16-202ENST00000570561 768 ntTSL 2 BASIC19.14■□□□□ 0.65
BRCA2P51587 SLC25A39-207ENST00000586016 1156 ntTSL 5 BASIC19.14■□□□□ 0.65
BRCA2P51587 AL590560.3-201ENST00000623350 461 ntBASIC19.14■□□□□ 0.65
BRCA2P51587 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
BRCA2P51587 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
BRCA2P51587 FST-202ENST00000396947 2538 ntTSL 5 BASIC19.14■□□□□ 0.65
BRCA2P51587 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC19.14■□□□□ 0.65
BRCA2P51587 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
BRCA2P51587 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
BRCA2P51587 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
BRCA2P51587 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
BRCA2P51587 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
BRCA2P51587 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
BRCA2P51587 TMEM247-204ENST00000434431 680 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
BRCA2P51587 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
BRCA2P51587 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
BRCA2P51587 AP003068.1-201ENST00000528887 544 ntTSL 4 BASIC19.13■□□□□ 0.65
BRCA2P51587 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC19.13■□□□□ 0.65
BRCA2P51587 AC135178.3-201ENST00000583963 531 ntTSL 4 BASIC19.13■□□□□ 0.65
BRCA2P51587 AC099568.2-201ENST00000609194 695 ntBASIC19.13■□□□□ 0.65
BRCA2P51587 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
BRCA2P51587 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC19.13■□□□□ 0.65
BRCA2P51587 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
BRCA2P51587 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
BRCA2P51587 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
BRCA2P51587 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC19.13■□□□□ 0.65
BRCA2P51587 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
BRCA2P51587 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
BRCA2P51587 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
BRCA2P51587 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC19.13■□□□□ 0.65
BRCA2P51587 ZNF589-204ENST00000440261 917 ntTSL 2 BASIC19.13■□□□□ 0.65
BRCA2P51587 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
BRCA2P51587 STK19B-204ENST00000512515 211 ntBASIC19.13■□□□□ 0.65
BRCA2P51587 AC027369.6-201ENST00000525520 931 ntBASIC19.13■□□□□ 0.65
BRCA2P51587 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC19.13■□□□□ 0.65
BRCA2P51587 USB1-203ENST00000539737 1212 ntTSL 2 BASIC19.13■□□□□ 0.65
BRCA2P51587 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
BRCA2P51587 AL020996.1-203ENST00000536896 2307 ntBASIC19.13■□□□□ 0.65
BRCA2P51587 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
BRCA2P51587 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
BRCA2P51587 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC19.13■□□□□ 0.65
BRCA2P51587 SUMF2-205ENST00000413756 1171 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
BRCA2P51587 AC092658.1-201ENST00000505836 891 ntBASIC19.13■□□□□ 0.65
BRCA2P51587 IGHV3OR16-16-201ENST00000563644 343 ntBASIC19.13■□□□□ 0.65
BRCA2P51587 MIR4538-201ENST00000581377 78 ntBASIC19.13■□□□□ 0.65
BRCA2P51587 AP005482.2-201ENST00000587889 310 ntTSL 5 BASIC19.13■□□□□ 0.65
BRCA2P51587 AC004840.1-201ENST00000636359 365 ntBASIC19.13■□□□□ 0.65
BRCA2P51587 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
BRCA2P51587 REXO1L6P-201ENST00000603433 1515 ntBASIC19.13■□□□□ 0.65
BRCA2P51587 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
BRCA2P51587 Z98749.2-207ENST00000443658 679 ntTSL 2 BASIC19.12■□□□□ 0.65
BRCA2P51587 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC19.12■□□□□ 0.65
BRCA2P51587 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC19.12■□□□□ 0.65
BRCA2P51587 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC19.12■□□□□ 0.65
BRCA2P51587 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
BRCA2P51587 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC19.12■□□□□ 0.65
BRCA2P51587 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
BRCA2P51587 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
BRCA2P51587 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC19.12■□□□□ 0.65
BRCA2P51587 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
BRCA2P51587 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
BRCA2P51587 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC19.12■□□□□ 0.65
BRCA2P51587 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC19.12■□□□□ 0.65
BRCA2P51587 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC19.12■□□□□ 0.65
BRCA2P51587 TRAPPC6A-204ENST00000588062 695 ntTSL 2 BASIC19.12■□□□□ 0.65
BRCA2P51587 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC19.12■□□□□ 0.65
BRCA2P51587 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC19.12■□□□□ 0.65
BRCA2P51587 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC19.12■□□□□ 0.65
BRCA2P51587 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC19.12■□□□□ 0.65
BRCA2P51587 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
BRCA2P51587 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
BRCA2P51587 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
BRCA2P51587 RBM24-203ENST00000425446 1034 ntTSL 3 BASIC19.12■□□□□ 0.65
BRCA2P51587 TBC1D16-205ENST00000572862 1141 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
BRCA2P51587 AL009183.1-201ENST00000603760 355 ntBASIC19.12■□□□□ 0.65
BRCA2P51587 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC19.12■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 40.5 ms