Protein–RNA interactions for Protein: P35244

RPA3, Replication protein A 14 kDa subunit, humanhuman

Predicted RBP Predictions only

Length 121 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPA3P35244 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
RPA3P35244 AC005104.2-201ENST00000427818 678 ntBASIC17.55■□□□□ 0.4
RPA3P35244 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
RPA3P35244 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC17.55■□□□□ 0.4
RPA3P35244 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC17.55■□□□□ 0.4
RPA3P35244 PPOX-214ENST00000535223 664 ntTSL 3 BASIC17.55■□□□□ 0.4
RPA3P35244 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
RPA3P35244 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC17.55■□□□□ 0.4
RPA3P35244 AC092171.3-201ENST00000610122 2651 ntBASIC17.55■□□□□ 0.4
RPA3P35244 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
RPA3P35244 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
RPA3P35244 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
RPA3P35244 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
RPA3P35244 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC17.55■□□□□ 0.4
RPA3P35244 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
RPA3P35244 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
RPA3P35244 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC17.55■□□□□ 0.4
RPA3P35244 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
RPA3P35244 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
RPA3P35244 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
RPA3P35244 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
RPA3P35244 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
RPA3P35244 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
RPA3P35244 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC17.54■□□□□ 0.4
RPA3P35244 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC17.54■□□□□ 0.4
RPA3P35244 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
RPA3P35244 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
RPA3P35244 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
RPA3P35244 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
RPA3P35244 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
RPA3P35244 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
RPA3P35244 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC17.54■□□□□ 0.4
RPA3P35244 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC17.54■□□□□ 0.4
RPA3P35244 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
RPA3P35244 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC17.54■□□□□ 0.4
RPA3P35244 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC17.54■□□□□ 0.4
RPA3P35244 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC17.54■□□□□ 0.4
RPA3P35244 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC17.54■□□□□ 0.4
RPA3P35244 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC17.54■□□□□ 0.4
RPA3P35244 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC17.54■□□□□ 0.4
RPA3P35244 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC17.54■□□□□ 0.4
RPA3P35244 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC17.54■□□□□ 0.4
RPA3P35244 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC17.54■□□□□ 0.4
RPA3P35244 LINC02012-201ENST00000608206 1725 ntBASIC17.54■□□□□ 0.4
RPA3P35244 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
RPA3P35244 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
RPA3P35244 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
RPA3P35244 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
RPA3P35244 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC17.54■□□□□ 0.4
RPA3P35244 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC17.54■□□□□ 0.4
RPA3P35244 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC17.54■□□□□ 0.4
RPA3P35244 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
RPA3P35244 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
RPA3P35244 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC17.54■□□□□ 0.4
RPA3P35244 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
RPA3P35244 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC17.53■□□□□ 0.4
RPA3P35244 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
RPA3P35244 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
RPA3P35244 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC17.53■□□□□ 0.4
RPA3P35244 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC17.53■□□□□ 0.4
RPA3P35244 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
RPA3P35244 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC17.53■□□□□ 0.4
RPA3P35244 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC17.53■□□□□ 0.4
RPA3P35244 BX276092.7-203ENST00000637198 1536 ntBASIC17.53■□□□□ 0.4
RPA3P35244 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC17.53■□□□□ 0.4
RPA3P35244 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
RPA3P35244 IGHGP-201ENST00000390555 1178 ntBASIC17.53■□□□□ 0.4
RPA3P35244 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
RPA3P35244 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
RPA3P35244 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC17.53■□□□□ 0.4
RPA3P35244 NT5C-211ENST00000582170 653 ntTSL 3 BASIC17.53■□□□□ 0.4
RPA3P35244 DBP-204ENST00000599385 709 ntTSL 3 BASIC17.53■□□□□ 0.4
RPA3P35244 GPR32P1-201ENST00000601788 811 ntBASIC17.53■□□□□ 0.4
RPA3P35244 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
RPA3P35244 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
RPA3P35244 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
RPA3P35244 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
RPA3P35244 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC17.53■□□□□ 0.4
RPA3P35244 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC17.53■□□□□ 0.4
RPA3P35244 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
RPA3P35244 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
RPA3P35244 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
RPA3P35244 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
RPA3P35244 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC17.52■□□□□ 0.4
RPA3P35244 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
RPA3P35244 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC17.52■□□□□ 0.4
RPA3P35244 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC17.52■□□□□ 0.4
RPA3P35244 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC17.52■□□□□ 0.4
RPA3P35244 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
RPA3P35244 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC17.52■□□□□ 0.4
RPA3P35244 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
RPA3P35244 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
RPA3P35244 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
RPA3P35244 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
RPA3P35244 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
RPA3P35244 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
RPA3P35244 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC17.52■□□□□ 0.4
RPA3P35244 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
RPA3P35244 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC17.52■□□□□ 0.4
RPA3P35244 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC17.52■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 47.9 ms