Protein–RNA interactions for Protein: Q9Y6D6

ARFGEF1, Brefeldin A-inhibited guanine nucleotide-exchange protein 1, humanhuman

Predictions only

Length 1,849 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARFGEF1Q9Y6D6 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
ARFGEF1Q9Y6D6 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
ARFGEF1Q9Y6D6 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
ARFGEF1Q9Y6D6 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
ARFGEF1Q9Y6D6 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
ARFGEF1Q9Y6D6 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
ARFGEF1Q9Y6D6 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
ARFGEF1Q9Y6D6 ZDHHC4-203ENST00000396707 1461 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
ARFGEF1Q9Y6D6 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
ARFGEF1Q9Y6D6 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC20.92■□□□□ 0.94
ARFGEF1Q9Y6D6 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC20.92■□□□□ 0.94
ARFGEF1Q9Y6D6 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
ARFGEF1Q9Y6D6 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC20.92■□□□□ 0.94
ARFGEF1Q9Y6D6 AP003385.5-201ENST00000533876 555 ntTSL 4 BASIC20.92■□□□□ 0.94
ARFGEF1Q9Y6D6 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC20.92■□□□□ 0.94
ARFGEF1Q9Y6D6 AC132938.2-201ENST00000579188 680 ntBASIC20.92■□□□□ 0.94
ARFGEF1Q9Y6D6 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC20.92■□□□□ 0.94
ARFGEF1Q9Y6D6 GPER1-207ENST00000619052 571 ntTSL 2 BASIC20.92■□□□□ 0.94
ARFGEF1Q9Y6D6 AL591163.1-201ENST00000641757 987 ntBASIC20.92■□□□□ 0.94
ARFGEF1Q9Y6D6 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC20.92■□□□□ 0.94
ARFGEF1Q9Y6D6 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC20.91■□□□□ 0.94
ARFGEF1Q9Y6D6 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC20.91■□□□□ 0.94
ARFGEF1Q9Y6D6 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
ARFGEF1Q9Y6D6 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC20.91■□□□□ 0.94
ARFGEF1Q9Y6D6 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC20.91■□□□□ 0.94
ARFGEF1Q9Y6D6 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC20.91■□□□□ 0.94
ARFGEF1Q9Y6D6 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
ARFGEF1Q9Y6D6 HNRNPRP1-201ENST00000453465 1695 ntBASIC20.91■□□□□ 0.94
ARFGEF1Q9Y6D6 RHOC-206ENST00000369637 888 ntAPPRIS P1 TSL 3 BASIC20.91■□□□□ 0.94
ARFGEF1Q9Y6D6 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC20.91■□□□□ 0.94
ARFGEF1Q9Y6D6 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC20.91■□□□□ 0.94
ARFGEF1Q9Y6D6 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
ARFGEF1Q9Y6D6 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC20.91■□□□□ 0.94
ARFGEF1Q9Y6D6 MPI-209ENST00000564003 1195 ntTSL 2 BASIC20.91■□□□□ 0.94
ARFGEF1Q9Y6D6 PRR29-204ENST00000577953 565 ntTSL 4 BASIC20.91■□□□□ 0.94
ARFGEF1Q9Y6D6 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC20.91■□□□□ 0.94
ARFGEF1Q9Y6D6 ELOF1-208ENST00000591912 899 ntTSL 5 BASIC20.91■□□□□ 0.94
ARFGEF1Q9Y6D6 MIR6805-201ENST00000615055 62 ntBASIC20.91■□□□□ 0.94
ARFGEF1Q9Y6D6 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC20.91■□□□□ 0.94
ARFGEF1Q9Y6D6 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC20.91■□□□□ 0.94
ARFGEF1Q9Y6D6 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC20.91■□□□□ 0.94
ARFGEF1Q9Y6D6 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
ARFGEF1Q9Y6D6 AC046185.3-201ENST00000623228 1824 ntBASIC20.9■□□□□ 0.94
ARFGEF1Q9Y6D6 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
ARFGEF1Q9Y6D6 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
ARFGEF1Q9Y6D6 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC20.9■□□□□ 0.94
ARFGEF1Q9Y6D6 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
ARFGEF1Q9Y6D6 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
ARFGEF1Q9Y6D6 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
ARFGEF1Q9Y6D6 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
ARFGEF1Q9Y6D6 IFITM2-204ENST00000533141 588 ntAPPRIS ALT2 TSL 4 BASIC20.9■□□□□ 0.94
ARFGEF1Q9Y6D6 AC138969.3-201ENST00000546612 1459 ntBASIC20.9■□□□□ 0.94
ARFGEF1Q9Y6D6 AC138932.2-201ENST00000548268 1459 ntBASIC20.9■□□□□ 0.94
ARFGEF1Q9Y6D6 AC126755.4-201ENST00000549796 1459 ntBASIC20.9■□□□□ 0.94
ARFGEF1Q9Y6D6 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
ARFGEF1Q9Y6D6 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
ARFGEF1Q9Y6D6 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
ARFGEF1Q9Y6D6 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
ARFGEF1Q9Y6D6 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
ARFGEF1Q9Y6D6 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
ARFGEF1Q9Y6D6 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
ARFGEF1Q9Y6D6 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC20.9■□□□□ 0.94
ARFGEF1Q9Y6D6 RNU1-129P-201ENST00000384064 167 ntBASIC20.9■□□□□ 0.94
ARFGEF1Q9Y6D6 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
ARFGEF1Q9Y6D6 AC119751.2-201ENST00000504529 210 ntBASIC20.9■□□□□ 0.94
ARFGEF1Q9Y6D6 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC20.9■□□□□ 0.94
ARFGEF1Q9Y6D6 U1.21-201ENST00000580816 167 ntBASIC20.9■□□□□ 0.94
ARFGEF1Q9Y6D6 TXNL4A-212ENST00000592957 546 ntTSL 3 BASIC20.9■□□□□ 0.94
ARFGEF1Q9Y6D6 AL844908.2-201ENST00000609461 460 ntBASIC20.9■□□□□ 0.94
ARFGEF1Q9Y6D6 AC008738.7-201ENST00000609744 511 ntBASIC20.9■□□□□ 0.94
ARFGEF1Q9Y6D6 AC004790.1-201ENST00000612686 536 ntBASIC20.9■□□□□ 0.94
ARFGEF1Q9Y6D6 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC20.9■□□□□ 0.94
ARFGEF1Q9Y6D6 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC20.89■□□□□ 0.94
ARFGEF1Q9Y6D6 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
ARFGEF1Q9Y6D6 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC20.89■□□□□ 0.94
ARFGEF1Q9Y6D6 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
ARFGEF1Q9Y6D6 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.94
ARFGEF1Q9Y6D6 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
ARFGEF1Q9Y6D6 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
ARFGEF1Q9Y6D6 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.93
ARFGEF1Q9Y6D6 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
ARFGEF1Q9Y6D6 ZFAND2B-203ENST00000409206 1159 ntTSL 2 BASIC20.89■□□□□ 0.93
ARFGEF1Q9Y6D6 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC20.89■□□□□ 0.93
ARFGEF1Q9Y6D6 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.93
ARFGEF1Q9Y6D6 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC20.89■□□□□ 0.93
ARFGEF1Q9Y6D6 AC016727.1-204ENST00000578974 420 ntTSL 3 BASIC20.89■□□□□ 0.93
ARFGEF1Q9Y6D6 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC20.89■□□□□ 0.93
ARFGEF1Q9Y6D6 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC20.89■□□□□ 0.93
ARFGEF1Q9Y6D6 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.93
ARFGEF1Q9Y6D6 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
ARFGEF1Q9Y6D6 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC20.89■□□□□ 0.93
ARFGEF1Q9Y6D6 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
ARFGEF1Q9Y6D6 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC20.89■□□□□ 0.93
ARFGEF1Q9Y6D6 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
ARFGEF1Q9Y6D6 GRAMD4P3-201ENST00000621665 1669 ntBASIC20.88■□□□□ 0.93
ARFGEF1Q9Y6D6 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
ARFGEF1Q9Y6D6 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC20.88■□□□□ 0.93
ARFGEF1Q9Y6D6 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC20.88■□□□□ 0.93
ARFGEF1Q9Y6D6 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
ARFGEF1Q9Y6D6 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC20.88■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 51.8 ms