Protein–RNA interactions for Protein: Q96FT9

IFT43, Intraflagellar transport protein 43 homolog, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT43Q96FT9 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC17.92■□□□□ 0.46
IFT43Q96FT9 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
IFT43Q96FT9 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
IFT43Q96FT9 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
IFT43Q96FT9 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
IFT43Q96FT9 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC17.92■□□□□ 0.46
IFT43Q96FT9 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC17.92■□□□□ 0.46
IFT43Q96FT9 AD000864.1-201ENST00000624076 2295 ntBASIC17.92■□□□□ 0.46
IFT43Q96FT9 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC17.92■□□□□ 0.46
IFT43Q96FT9 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC17.92■□□□□ 0.46
IFT43Q96FT9 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
IFT43Q96FT9 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC17.92■□□□□ 0.46
IFT43Q96FT9 ADM-208ENST00000534464 1640 ntTSL 2 BASIC17.92■□□□□ 0.46
IFT43Q96FT9 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
IFT43Q96FT9 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
IFT43Q96FT9 CCS-201ENST00000310190 942 ntTSL 5 BASIC17.92■□□□□ 0.46
IFT43Q96FT9 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC17.92■□□□□ 0.46
IFT43Q96FT9 MINOS1P3-201ENST00000457048 203 ntBASIC17.92■□□□□ 0.46
IFT43Q96FT9 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC17.92■□□□□ 0.46
IFT43Q96FT9 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC17.92■□□□□ 0.46
IFT43Q96FT9 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
IFT43Q96FT9 AP005901.3-202ENST00000581653 237 ntBASIC17.92■□□□□ 0.46
IFT43Q96FT9 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
IFT43Q96FT9 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC17.92■□□□□ 0.46
IFT43Q96FT9 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
IFT43Q96FT9 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC17.92■□□□□ 0.46
IFT43Q96FT9 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC17.92■□□□□ 0.46
IFT43Q96FT9 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC17.92■□□□□ 0.46
IFT43Q96FT9 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
IFT43Q96FT9 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
IFT43Q96FT9 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC17.92■□□□□ 0.46
IFT43Q96FT9 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
IFT43Q96FT9 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
IFT43Q96FT9 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC17.92■□□□□ 0.46
IFT43Q96FT9 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
IFT43Q96FT9 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
IFT43Q96FT9 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC17.91■□□□□ 0.46
IFT43Q96FT9 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
IFT43Q96FT9 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
IFT43Q96FT9 NF2-208ENST00000403435 2568 ntTSL 5 BASIC17.91■□□□□ 0.46
IFT43Q96FT9 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
IFT43Q96FT9 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
IFT43Q96FT9 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
IFT43Q96FT9 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
IFT43Q96FT9 AC125634.1-201ENST00000438758 1403 ntBASIC17.91■□□□□ 0.46
IFT43Q96FT9 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
IFT43Q96FT9 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
IFT43Q96FT9 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
IFT43Q96FT9 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC17.91■□□□□ 0.46
IFT43Q96FT9 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
IFT43Q96FT9 AC079781.3-201ENST00000449110 356 ntBASIC17.91■□□□□ 0.46
IFT43Q96FT9 SAPCD2P3-201ENST00000455031 850 ntBASIC17.91■□□□□ 0.46
IFT43Q96FT9 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC17.91■□□□□ 0.46
IFT43Q96FT9 AC009078.2-202ENST00000463353 338 ntBASIC17.91■□□□□ 0.46
IFT43Q96FT9 AP002469.2-201ENST00000531724 424 ntBASIC17.91■□□□□ 0.46
IFT43Q96FT9 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC17.91■□□□□ 0.46
IFT43Q96FT9 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
IFT43Q96FT9 AC005336.2-201ENST00000593183 939 ntBASIC17.91■□□□□ 0.46
IFT43Q96FT9 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
IFT43Q96FT9 CALM3-211ENST00000598871 561 ntTSL 4 BASIC17.91■□□□□ 0.46
IFT43Q96FT9 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC17.91■□□□□ 0.46
IFT43Q96FT9 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
IFT43Q96FT9 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
IFT43Q96FT9 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
IFT43Q96FT9 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
IFT43Q96FT9 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
IFT43Q96FT9 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
IFT43Q96FT9 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC17.91■□□□□ 0.46
IFT43Q96FT9 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC17.91■□□□□ 0.46
IFT43Q96FT9 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC17.91■□□□□ 0.46
IFT43Q96FT9 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
IFT43Q96FT9 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
IFT43Q96FT9 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
IFT43Q96FT9 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC17.91■□□□□ 0.46
IFT43Q96FT9 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC17.91■□□□□ 0.46
IFT43Q96FT9 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
IFT43Q96FT9 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
IFT43Q96FT9 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC17.9■□□□□ 0.46
IFT43Q96FT9 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
IFT43Q96FT9 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
IFT43Q96FT9 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC17.9■□□□□ 0.46
IFT43Q96FT9 MST1L-201ENST00000442552 2185 ntBASIC17.9■□□□□ 0.46
IFT43Q96FT9 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC17.9■□□□□ 0.46
IFT43Q96FT9 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
IFT43Q96FT9 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC17.9■□□□□ 0.46
IFT43Q96FT9 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
IFT43Q96FT9 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC17.9■□□□□ 0.46
IFT43Q96FT9 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
IFT43Q96FT9 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
IFT43Q96FT9 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC17.9■□□□□ 0.46
IFT43Q96FT9 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC17.9■□□□□ 0.46
IFT43Q96FT9 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
IFT43Q96FT9 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
IFT43Q96FT9 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
IFT43Q96FT9 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
IFT43Q96FT9 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
IFT43Q96FT9 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC17.9■□□□□ 0.46
IFT43Q96FT9 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
IFT43Q96FT9 IGHV3OR16-7-201ENST00000604106 360 ntBASIC17.9■□□□□ 0.46
IFT43Q96FT9 AL138831.2-201ENST00000606564 490 ntBASIC17.9■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 27.3 ms