Protein–RNA interactions for Protein: Q96DX8

RTP4, Receptor-transporting protein 4, humanhuman

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTP4Q96DX8 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
RTP4Q96DX8 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC17.68■□□□□ 0.42
RTP4Q96DX8 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC17.68■□□□□ 0.42
RTP4Q96DX8 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
RTP4Q96DX8 FRMD8P1-201ENST00000440433 1524 ntBASIC17.68■□□□□ 0.42
RTP4Q96DX8 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC17.68■□□□□ 0.42
RTP4Q96DX8 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
RTP4Q96DX8 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC17.68■□□□□ 0.42
RTP4Q96DX8 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
RTP4Q96DX8 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
RTP4Q96DX8 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
RTP4Q96DX8 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC17.68■□□□□ 0.42
RTP4Q96DX8 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
RTP4Q96DX8 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
RTP4Q96DX8 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC17.68■□□□□ 0.42
RTP4Q96DX8 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC17.68■□□□□ 0.42
RTP4Q96DX8 RCN1P2-201ENST00000398357 915 ntBASIC17.68■□□□□ 0.42
RTP4Q96DX8 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
RTP4Q96DX8 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC17.68■□□□□ 0.42
RTP4Q96DX8 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
RTP4Q96DX8 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
RTP4Q96DX8 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
RTP4Q96DX8 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC17.68■□□□□ 0.42
RTP4Q96DX8 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC17.68■□□□□ 0.42
RTP4Q96DX8 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC17.68■□□□□ 0.42
RTP4Q96DX8 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC17.68■□□□□ 0.42
RTP4Q96DX8 AL118508.1-201ENST00000613502 2345 ntBASIC17.68■□□□□ 0.42
RTP4Q96DX8 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC17.68■□□□□ 0.42
RTP4Q96DX8 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC17.68■□□□□ 0.42
RTP4Q96DX8 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
RTP4Q96DX8 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC17.68■□□□□ 0.42
RTP4Q96DX8 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
RTP4Q96DX8 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
RTP4Q96DX8 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
RTP4Q96DX8 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
RTP4Q96DX8 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC17.67■□□□□ 0.42
RTP4Q96DX8 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC17.67■□□□□ 0.42
RTP4Q96DX8 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC17.67■□□□□ 0.42
RTP4Q96DX8 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
RTP4Q96DX8 AC092068.3-201ENST00000587894 2016 ntBASIC17.67■□□□□ 0.42
RTP4Q96DX8 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC17.67■□□□□ 0.42
RTP4Q96DX8 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
RTP4Q96DX8 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC17.67■□□□□ 0.42
RTP4Q96DX8 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
RTP4Q96DX8 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
RTP4Q96DX8 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC17.67■□□□□ 0.42
RTP4Q96DX8 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
RTP4Q96DX8 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
RTP4Q96DX8 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
RTP4Q96DX8 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC17.67■□□□□ 0.42
RTP4Q96DX8 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC17.67■□□□□ 0.42
RTP4Q96DX8 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC17.67■□□□□ 0.42
RTP4Q96DX8 NKTR-203ENST00000442970 646 ntTSL 2 BASIC17.67■□□□□ 0.42
RTP4Q96DX8 MINOS1P3-201ENST00000457048 203 ntBASIC17.67■□□□□ 0.42
RTP4Q96DX8 AC096582.2-201ENST00000510860 516 ntBASIC17.67■□□□□ 0.42
RTP4Q96DX8 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC17.67■□□□□ 0.42
RTP4Q96DX8 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC17.67■□□□□ 0.42
RTP4Q96DX8 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC17.67■□□□□ 0.42
RTP4Q96DX8 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
RTP4Q96DX8 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC17.67■□□□□ 0.42
RTP4Q96DX8 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC17.67■□□□□ 0.42
RTP4Q96DX8 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
RTP4Q96DX8 FLJ38576-201ENST00000623820 2459 ntBASIC17.67■□□□□ 0.42
RTP4Q96DX8 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
RTP4Q96DX8 GPR89P-201ENST00000407924 1495 ntBASIC17.67■□□□□ 0.42
RTP4Q96DX8 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
RTP4Q96DX8 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC17.67■□□□□ 0.42
RTP4Q96DX8 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
RTP4Q96DX8 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC17.67■□□□□ 0.42
RTP4Q96DX8 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
RTP4Q96DX8 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
RTP4Q96DX8 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC17.67■□□□□ 0.42
RTP4Q96DX8 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC17.67■□□□□ 0.42
RTP4Q96DX8 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
RTP4Q96DX8 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC17.67■□□□□ 0.42
RTP4Q96DX8 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC17.67■□□□□ 0.42
RTP4Q96DX8 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
RTP4Q96DX8 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC17.67■□□□□ 0.42
RTP4Q96DX8 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC17.66■□□□□ 0.42
RTP4Q96DX8 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
RTP4Q96DX8 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC17.66■□□□□ 0.42
RTP4Q96DX8 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
RTP4Q96DX8 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
RTP4Q96DX8 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC17.66■□□□□ 0.42
RTP4Q96DX8 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
RTP4Q96DX8 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
RTP4Q96DX8 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
RTP4Q96DX8 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC17.66■□□□□ 0.42
RTP4Q96DX8 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC17.66■□□□□ 0.42
RTP4Q96DX8 POM121L3P-201ENST00000419331 1163 ntBASIC17.66■□□□□ 0.42
RTP4Q96DX8 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC17.66■□□□□ 0.42
RTP4Q96DX8 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC17.66■□□□□ 0.42
RTP4Q96DX8 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
RTP4Q96DX8 IL11-204ENST00000590625 1028 ntTSL 2 BASIC17.66■□□□□ 0.42
RTP4Q96DX8 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC17.66■□□□□ 0.42
RTP4Q96DX8 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC17.66■□□□□ 0.42
RTP4Q96DX8 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
RTP4Q96DX8 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC17.66■□□□□ 0.42
RTP4Q96DX8 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
RTP4Q96DX8 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 23.1 ms