Protein–RNA interactions for Protein: Q969V3

NCLN, Nicalin, humanhuman

Predictions only

Length 563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCLNQ969V3 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC16.88■□□□□ 0.29
NCLNQ969V3 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC16.88■□□□□ 0.29
NCLNQ969V3 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
NCLNQ969V3 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
NCLNQ969V3 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
NCLNQ969V3 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC16.88■□□□□ 0.29
NCLNQ969V3 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
NCLNQ969V3 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC16.88■□□□□ 0.29
NCLNQ969V3 AP002383.4-201ENST00000442518 975 ntBASIC16.88■□□□□ 0.29
NCLNQ969V3 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
NCLNQ969V3 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
NCLNQ969V3 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC16.88■□□□□ 0.29
NCLNQ969V3 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC16.88■□□□□ 0.29
NCLNQ969V3 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC16.88■□□□□ 0.29
NCLNQ969V3 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC16.88■□□□□ 0.29
NCLNQ969V3 AP002414.4-201ENST00000589764 1148 ntBASIC16.88■□□□□ 0.29
NCLNQ969V3 IGHV3-41-201ENST00000613121 348 ntBASIC16.88■□□□□ 0.29
NCLNQ969V3 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
NCLNQ969V3 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC16.88■□□□□ 0.29
NCLNQ969V3 KRT18P1-202ENST00000452408 1331 ntBASIC16.88■□□□□ 0.29
NCLNQ969V3 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
NCLNQ969V3 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
NCLNQ969V3 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC16.88■□□□□ 0.29
NCLNQ969V3 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
NCLNQ969V3 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
NCLNQ969V3 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
NCLNQ969V3 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
NCLNQ969V3 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
NCLNQ969V3 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
NCLNQ969V3 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC16.87■□□□□ 0.29
NCLNQ969V3 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC16.87■□□□□ 0.29
NCLNQ969V3 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
NCLNQ969V3 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
NCLNQ969V3 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
NCLNQ969V3 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC16.87■□□□□ 0.29
NCLNQ969V3 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
NCLNQ969V3 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
NCLNQ969V3 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
NCLNQ969V3 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
NCLNQ969V3 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC16.87■□□□□ 0.29
NCLNQ969V3 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC16.87■□□□□ 0.29
NCLNQ969V3 GUSBP12-201ENST00000513727 720 ntBASIC16.87■□□□□ 0.29
NCLNQ969V3 DUTP2-201ENST00000519164 463 ntBASIC16.87■□□□□ 0.29
NCLNQ969V3 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC16.87■□□□□ 0.29
NCLNQ969V3 AC090616.6-201ENST00000582640 721 ntBASIC16.87■□□□□ 0.29
NCLNQ969V3 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC16.87■□□□□ 0.29
NCLNQ969V3 HGNC:18790-203ENST00000433139 2254 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
NCLNQ969V3 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
NCLNQ969V3 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC16.87■□□□□ 0.29
NCLNQ969V3 AC022898.2-201ENST00000616822 1312 ntBASIC16.87■□□□□ 0.29
NCLNQ969V3 AC132938.6-201ENST00000623828 1655 ntBASIC16.87■□□□□ 0.29
NCLNQ969V3 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
NCLNQ969V3 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
NCLNQ969V3 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
NCLNQ969V3 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC16.87■□□□□ 0.29
NCLNQ969V3 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
NCLNQ969V3 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
NCLNQ969V3 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC16.87■□□□□ 0.29
NCLNQ969V3 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
NCLNQ969V3 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
NCLNQ969V3 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
NCLNQ969V3 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC16.86■□□□□ 0.29
NCLNQ969V3 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
NCLNQ969V3 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC16.86■□□□□ 0.29
NCLNQ969V3 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC16.86■□□□□ 0.29
NCLNQ969V3 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC16.86■□□□□ 0.29
NCLNQ969V3 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
NCLNQ969V3 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
NCLNQ969V3 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC16.86■□□□□ 0.29
NCLNQ969V3 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC16.86■□□□□ 0.29
NCLNQ969V3 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
NCLNQ969V3 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC16.86■□□□□ 0.29
NCLNQ969V3 PCSK5-205ENST00000545128 9538 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
NCLNQ969V3 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
NCLNQ969V3 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC16.86■□□□□ 0.29
NCLNQ969V3 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
NCLNQ969V3 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
NCLNQ969V3 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
NCLNQ969V3 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
NCLNQ969V3 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC16.86■□□□□ 0.29
NCLNQ969V3 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
NCLNQ969V3 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC16.86■□□□□ 0.29
NCLNQ969V3 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
NCLNQ969V3 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
NCLNQ969V3 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC16.86■□□□□ 0.29
NCLNQ969V3 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC16.86■□□□□ 0.29
NCLNQ969V3 AC124864.1-201ENST00000623408 392 ntBASIC16.86■□□□□ 0.29
NCLNQ969V3 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
NCLNQ969V3 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
NCLNQ969V3 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC16.86■□□□□ 0.29
NCLNQ969V3 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
NCLNQ969V3 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
NCLNQ969V3 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC16.86■□□□□ 0.29
NCLNQ969V3 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC16.86■□□□□ 0.29
NCLNQ969V3 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
NCLNQ969V3 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
NCLNQ969V3 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC16.86■□□□□ 0.29
NCLNQ969V3 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC16.85■□□□□ 0.29
NCLNQ969V3 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
NCLNQ969V3 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC16.85■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 17.6 ms