Protein–RNA interactions for Protein: Q8N8U3

RTL3, Retrotransposon Gag-like protein 3, humanhuman

Known RBP Predictions only

Length 475 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL3Q8N8U3 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
RTL3Q8N8U3 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC17.78■□□□□ 0.44
RTL3Q8N8U3 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
RTL3Q8N8U3 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC17.78■□□□□ 0.44
RTL3Q8N8U3 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
RTL3Q8N8U3 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
RTL3Q8N8U3 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
RTL3Q8N8U3 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
RTL3Q8N8U3 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
RTL3Q8N8U3 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
RTL3Q8N8U3 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC17.78■□□□□ 0.44
RTL3Q8N8U3 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
RTL3Q8N8U3 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
RTL3Q8N8U3 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC17.78■□□□□ 0.44
RTL3Q8N8U3 AC139887.3-201ENST00000568585 713 ntBASIC17.78■□□□□ 0.44
RTL3Q8N8U3 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC17.78■□□□□ 0.44
RTL3Q8N8U3 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC17.78■□□□□ 0.44
RTL3Q8N8U3 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
RTL3Q8N8U3 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
RTL3Q8N8U3 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
RTL3Q8N8U3 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
RTL3Q8N8U3 EML3-212ENST00000494176 2901 ntTSL 2 BASIC17.78■□□□□ 0.44
RTL3Q8N8U3 EML3-216ENST00000529309 2909 ntTSL 2 BASIC17.78■□□□□ 0.44
RTL3Q8N8U3 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
RTL3Q8N8U3 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
RTL3Q8N8U3 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
RTL3Q8N8U3 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
RTL3Q8N8U3 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
RTL3Q8N8U3 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
RTL3Q8N8U3 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC17.77■□□□□ 0.44
RTL3Q8N8U3 MED22-202ENST00000371999 987 ntTSL 3 BASIC17.77■□□□□ 0.44
RTL3Q8N8U3 LAGE3P1-201ENST00000425356 484 ntBASIC17.77■□□□□ 0.44
RTL3Q8N8U3 SDCCAG3P1-201ENST00000589292 1150 ntBASIC17.77■□□□□ 0.44
RTL3Q8N8U3 AL353135.1-201ENST00000606729 504 ntBASIC17.77■□□□□ 0.44
RTL3Q8N8U3 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
RTL3Q8N8U3 AC107918.4-202ENST00000641623 219 ntBASIC17.77■□□□□ 0.44
RTL3Q8N8U3 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
RTL3Q8N8U3 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
RTL3Q8N8U3 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC17.77■□□□□ 0.44
RTL3Q8N8U3 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC17.77■□□□□ 0.44
RTL3Q8N8U3 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
RTL3Q8N8U3 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
RTL3Q8N8U3 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
RTL3Q8N8U3 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC17.77■□□□□ 0.43
RTL3Q8N8U3 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC17.77■□□□□ 0.43
RTL3Q8N8U3 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.43
RTL3Q8N8U3 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.43
RTL3Q8N8U3 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC17.76■□□□□ 0.43
RTL3Q8N8U3 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
RTL3Q8N8U3 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
RTL3Q8N8U3 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
RTL3Q8N8U3 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC17.76■□□□□ 0.43
RTL3Q8N8U3 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
RTL3Q8N8U3 AC108860.2-201ENST00000562760 2183 ntBASIC17.76■□□□□ 0.43
RTL3Q8N8U3 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
RTL3Q8N8U3 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC17.76■□□□□ 0.43
RTL3Q8N8U3 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC17.76■□□□□ 0.43
RTL3Q8N8U3 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
RTL3Q8N8U3 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
RTL3Q8N8U3 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
RTL3Q8N8U3 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
RTL3Q8N8U3 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
RTL3Q8N8U3 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
RTL3Q8N8U3 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC17.76■□□□□ 0.43
RTL3Q8N8U3 RPS2P1-201ENST00000434010 821 ntBASIC17.76■□□□□ 0.43
RTL3Q8N8U3 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC17.76■□□□□ 0.43
RTL3Q8N8U3 PPIE-208ENST00000470213 927 ntTSL 3 BASIC17.76■□□□□ 0.43
RTL3Q8N8U3 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC17.76■□□□□ 0.43
RTL3Q8N8U3 MOK-208ENST00000519058 917 ntTSL 2 BASIC17.76■□□□□ 0.43
RTL3Q8N8U3 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC17.76■□□□□ 0.43
RTL3Q8N8U3 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC17.76■□□□□ 0.43
RTL3Q8N8U3 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC17.76■□□□□ 0.43
RTL3Q8N8U3 AL139424.1-201ENST00000607572 797 ntBASIC17.76■□□□□ 0.43
RTL3Q8N8U3 AC148477.8-201ENST00000624298 468 ntBASIC17.76■□□□□ 0.43
RTL3Q8N8U3 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
RTL3Q8N8U3 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC17.76■□□□□ 0.43
RTL3Q8N8U3 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC17.76■□□□□ 0.43
RTL3Q8N8U3 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
RTL3Q8N8U3 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
RTL3Q8N8U3 FZD10-202ENST00000539839 3282 ntBASIC17.76■□□□□ 0.43
RTL3Q8N8U3 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC17.76■□□□□ 0.43
RTL3Q8N8U3 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
RTL3Q8N8U3 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
RTL3Q8N8U3 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
RTL3Q8N8U3 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
RTL3Q8N8U3 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
RTL3Q8N8U3 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC17.75■□□□□ 0.43
RTL3Q8N8U3 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
RTL3Q8N8U3 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC17.75■□□□□ 0.43
RTL3Q8N8U3 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
RTL3Q8N8U3 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
RTL3Q8N8U3 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
RTL3Q8N8U3 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC17.75■□□□□ 0.43
RTL3Q8N8U3 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
RTL3Q8N8U3 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC17.75■□□□□ 0.43
RTL3Q8N8U3 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC17.75■□□□□ 0.43
RTL3Q8N8U3 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC17.75■□□□□ 0.43
RTL3Q8N8U3 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
RTL3Q8N8U3 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC17.75■□□□□ 0.43
RTL3Q8N8U3 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms