Protein–RNA interactions for Protein: Q5VT99

LRRC38, Leucine-rich repeat-containing protein 38, humanhuman

Predictions only

Length 294 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC38Q5VT99 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
LRRC38Q5VT99 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC18.01■□□□□ 0.47
LRRC38Q5VT99 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC18.01■□□□□ 0.47
LRRC38Q5VT99 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC18.01■□□□□ 0.47
LRRC38Q5VT99 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC18.01■□□□□ 0.47
LRRC38Q5VT99 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC18.01■□□□□ 0.47
LRRC38Q5VT99 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
LRRC38Q5VT99 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
LRRC38Q5VT99 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC18.01■□□□□ 0.47
LRRC38Q5VT99 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC18.01■□□□□ 0.47
LRRC38Q5VT99 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC18.01■□□□□ 0.47
LRRC38Q5VT99 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
LRRC38Q5VT99 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
LRRC38Q5VT99 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
LRRC38Q5VT99 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
LRRC38Q5VT99 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC18.01■□□□□ 0.47
LRRC38Q5VT99 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC18.01■□□□□ 0.47
LRRC38Q5VT99 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
LRRC38Q5VT99 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
LRRC38Q5VT99 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
LRRC38Q5VT99 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC18■□□□□ 0.47
LRRC38Q5VT99 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC18■□□□□ 0.47
LRRC38Q5VT99 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC18■□□□□ 0.47
LRRC38Q5VT99 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC18■□□□□ 0.47
LRRC38Q5VT99 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC18■□□□□ 0.47
LRRC38Q5VT99 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
LRRC38Q5VT99 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC18■□□□□ 0.47
LRRC38Q5VT99 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
LRRC38Q5VT99 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC18■□□□□ 0.47
LRRC38Q5VT99 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC18■□□□□ 0.47
LRRC38Q5VT99 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC18■□□□□ 0.47
LRRC38Q5VT99 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
LRRC38Q5VT99 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC18■□□□□ 0.47
LRRC38Q5VT99 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC18■□□□□ 0.47
LRRC38Q5VT99 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC18■□□□□ 0.47
LRRC38Q5VT99 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC18■□□□□ 0.47
LRRC38Q5VT99 FRMD8P1-201ENST00000440433 1524 ntBASIC18■□□□□ 0.47
LRRC38Q5VT99 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
LRRC38Q5VT99 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
LRRC38Q5VT99 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC18■□□□□ 0.47
LRRC38Q5VT99 COPS8-203ENST00000409334 794 ntTSL 5 BASIC18■□□□□ 0.47
LRRC38Q5VT99 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC18■□□□□ 0.47
LRRC38Q5VT99 AC012615.1-201ENST00000565797 1299 ntBASIC18■□□□□ 0.47
LRRC38Q5VT99 COX5A-204ENST00000567270 579 ntTSL 3 BASIC18■□□□□ 0.47
LRRC38Q5VT99 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC18■□□□□ 0.47
LRRC38Q5VT99 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC18■□□□□ 0.47
LRRC38Q5VT99 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC18■□□□□ 0.47
LRRC38Q5VT99 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC18■□□□□ 0.47
LRRC38Q5VT99 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC18■□□□□ 0.47
LRRC38Q5VT99 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
LRRC38Q5VT99 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC18■□□□□ 0.47
LRRC38Q5VT99 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
LRRC38Q5VT99 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
LRRC38Q5VT99 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
LRRC38Q5VT99 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
LRRC38Q5VT99 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC17.99■□□□□ 0.47
LRRC38Q5VT99 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
LRRC38Q5VT99 SIGLEC16-201ENST00000599858 1437 ntBASIC17.99■□□□□ 0.47
LRRC38Q5VT99 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC17.99■□□□□ 0.47
LRRC38Q5VT99 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
LRRC38Q5VT99 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC17.99■□□□□ 0.47
LRRC38Q5VT99 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
LRRC38Q5VT99 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC17.99■□□□□ 0.47
LRRC38Q5VT99 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
LRRC38Q5VT99 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC17.99■□□□□ 0.47
LRRC38Q5VT99 SOD2-201ENST00000337404 991 ntTSL 2 BASIC17.99■□□□□ 0.47
LRRC38Q5VT99 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC17.99■□□□□ 0.47
LRRC38Q5VT99 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
LRRC38Q5VT99 SPDYE21P-201ENST00000413323 827 ntBASIC17.99■□□□□ 0.47
LRRC38Q5VT99 AL020989.1-201ENST00000422979 469 ntBASIC17.99■□□□□ 0.47
LRRC38Q5VT99 ACTG1P4-201ENST00000425123 1122 ntBASIC17.99■□□□□ 0.47
LRRC38Q5VT99 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC17.99■□□□□ 0.47
LRRC38Q5VT99 ATP5G2P1-201ENST00000433580 426 ntBASIC17.99■□□□□ 0.47
LRRC38Q5VT99 SIGLEC30P-201ENST00000455569 941 ntBASIC17.99■□□□□ 0.47
LRRC38Q5VT99 BET1L-206ENST00000486280 665 ntTSL 3 BASIC17.99■□□□□ 0.47
LRRC38Q5VT99 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC17.99■□□□□ 0.47
LRRC38Q5VT99 COX5A-202ENST00000562233 441 ntTSL 3 BASIC17.99■□□□□ 0.47
LRRC38Q5VT99 AC074051.2-201ENST00000565115 352 ntBASIC17.99■□□□□ 0.47
LRRC38Q5VT99 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC17.99■□□□□ 0.47
LRRC38Q5VT99 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
LRRC38Q5VT99 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC17.99■□□□□ 0.47
LRRC38Q5VT99 BCL10-202ENST00000620248 774 ntTSL 5 BASIC17.99■□□□□ 0.47
LRRC38Q5VT99 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
LRRC38Q5VT99 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC17.99■□□□□ 0.47
LRRC38Q5VT99 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC17.99■□□□□ 0.47
LRRC38Q5VT99 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
LRRC38Q5VT99 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
LRRC38Q5VT99 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC17.99■□□□□ 0.47
LRRC38Q5VT99 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC17.99■□□□□ 0.47
LRRC38Q5VT99 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC17.99■□□□□ 0.47
LRRC38Q5VT99 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
LRRC38Q5VT99 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
LRRC38Q5VT99 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC17.98■□□□□ 0.47
LRRC38Q5VT99 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
LRRC38Q5VT99 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
LRRC38Q5VT99 AC092068.3-201ENST00000587894 2016 ntBASIC17.98■□□□□ 0.47
LRRC38Q5VT99 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC17.98■□□□□ 0.47
LRRC38Q5VT99 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC17.98■□□□□ 0.47
LRRC38Q5VT99 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
LRRC38Q5VT99 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC17.98■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 24.1 ms