Protein–RNA interactions for Protein: Q5SXM2

SNAPC4, snRNA-activating protein complex subunit 4, humanhuman

Predictions only

Length 1,469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC4Q5SXM2 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC27.96■■■□□ 2.07
SNAPC4Q5SXM2 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC27.96■■■□□ 2.07
SNAPC4Q5SXM2 RHOC-206ENST00000369637 888 ntAPPRIS P1 TSL 3 BASIC27.95■■■□□ 2.07
SNAPC4Q5SXM2 DGCR5-201ENST00000399539 862 ntBASIC27.95■■■□□ 2.07
SNAPC4Q5SXM2 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC27.95■■■□□ 2.07
SNAPC4Q5SXM2 AC112492.5-201ENST00000421897 457 ntBASIC27.95■■■□□ 2.07
SNAPC4Q5SXM2 AC132938.2-201ENST00000579188 680 ntBASIC27.95■■■□□ 2.07
SNAPC4Q5SXM2 TMEM205-208ENST00000587948 688 ntAPPRIS P1 TSL 5 BASIC27.95■■■□□ 2.07
SNAPC4Q5SXM2 TMEM205-211ENST00000589555 788 ntAPPRIS P1 TSL 2 BASIC27.95■■■□□ 2.07
SNAPC4Q5SXM2 RNA5-8SN1-201ENST00000610460 153 ntBASIC27.95■■■□□ 2.07
SNAPC4Q5SXM2 RNA5-8SN5-202ENST00000612463 153 ntBASIC27.95■■■□□ 2.07
SNAPC4Q5SXM2 RNA5-8SN4-201ENST00000613359 153 ntBASIC27.95■■■□□ 2.07
SNAPC4Q5SXM2 RNA5-8SN5-201ENST00000619471 153 ntBASIC27.95■■■□□ 2.07
SNAPC4Q5SXM2 AL591163.1-201ENST00000641757 987 ntBASIC27.95■■■□□ 2.07
SNAPC4Q5SXM2 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC27.95■■■□□ 2.07
SNAPC4Q5SXM2 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC27.95■■■□□ 2.07
SNAPC4Q5SXM2 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC27.95■■■□□ 2.07
SNAPC4Q5SXM2 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC27.95■■■□□ 2.07
SNAPC4Q5SXM2 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC27.95■■■□□ 2.07
SNAPC4Q5SXM2 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC27.95■■■□□ 2.07
SNAPC4Q5SXM2 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC27.95■■■□□ 2.06
SNAPC4Q5SXM2 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC27.95■■■□□ 2.06
SNAPC4Q5SXM2 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC27.95■■■□□ 2.06
SNAPC4Q5SXM2 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC27.95■■■□□ 2.06
SNAPC4Q5SXM2 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC27.95■■■□□ 2.06
SNAPC4Q5SXM2 AC098614.1-201ENST00000368528 745 ntBASIC27.95■■■□□ 2.06
SNAPC4Q5SXM2 AL512384.1-201ENST00000406683 331 ntBASIC27.95■■■□□ 2.06
SNAPC4Q5SXM2 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC27.95■■■□□ 2.06
SNAPC4Q5SXM2 Z98749.2-207ENST00000443658 679 ntTSL 2 BASIC27.95■■■□□ 2.06
SNAPC4Q5SXM2 TRAPPC6A-204ENST00000588062 695 ntTSL 2 BASIC27.95■■■□□ 2.06
SNAPC4Q5SXM2 SNX12-206ENST00000622259 661 ntTSL 5 BASIC27.95■■■□□ 2.06
SNAPC4Q5SXM2 AL033527.4-201ENST00000641026 673 ntBASIC27.95■■■□□ 2.06
SNAPC4Q5SXM2 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC27.95■■■□□ 2.06
SNAPC4Q5SXM2 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC27.94■■■□□ 2.06
SNAPC4Q5SXM2 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC27.94■■■□□ 2.06
SNAPC4Q5SXM2 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC27.94■■■□□ 2.06
SNAPC4Q5SXM2 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC27.94■■■□□ 2.06
SNAPC4Q5SXM2 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC27.94■■■□□ 2.06
SNAPC4Q5SXM2 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC27.94■■■□□ 2.06
SNAPC4Q5SXM2 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC27.94■■■□□ 2.06
SNAPC4Q5SXM2 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC27.94■■■□□ 2.06
SNAPC4Q5SXM2 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC27.94■■■□□ 2.06
SNAPC4Q5SXM2 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC27.94■■■□□ 2.06
SNAPC4Q5SXM2 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC27.94■■■□□ 2.06
SNAPC4Q5SXM2 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC27.94■■■□□ 2.06
SNAPC4Q5SXM2 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC27.94■■■□□ 2.06
SNAPC4Q5SXM2 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC27.94■■■□□ 2.06
SNAPC4Q5SXM2 CLNS1A-210ENST00000528364 953 ntAPPRIS P1 TSL 3 BASIC27.94■■■□□ 2.06
SNAPC4Q5SXM2 AL138918.1-201ENST00000568306 659 ntBASIC27.94■■■□□ 2.06
SNAPC4Q5SXM2 AL031056.2-201ENST00000637957 1217 ntTSL 5 BASIC27.94■■■□□ 2.06
SNAPC4Q5SXM2 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC27.94■■■□□ 2.06
SNAPC4Q5SXM2 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC27.93■■■□□ 2.06
SNAPC4Q5SXM2 REXO1L11P-201ENST00000620964 1927 ntBASIC27.93■■■□□ 2.06
SNAPC4Q5SXM2 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC27.93■■■□□ 2.06
SNAPC4Q5SXM2 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC27.93■■■□□ 2.06
SNAPC4Q5SXM2 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC27.93■■■□□ 2.06
SNAPC4Q5SXM2 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC27.93■■■□□ 2.06
SNAPC4Q5SXM2 MXI1-205ENST00000393134 889 ntTSL 2 BASIC27.93■■■□□ 2.06
SNAPC4Q5SXM2 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC27.93■■■□□ 2.06
SNAPC4Q5SXM2 AC119751.2-201ENST00000504529 210 ntBASIC27.93■■■□□ 2.06
SNAPC4Q5SXM2 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC27.93■■■□□ 2.06
SNAPC4Q5SXM2 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC27.93■■■□□ 2.06
SNAPC4Q5SXM2 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC27.93■■■□□ 2.06
SNAPC4Q5SXM2 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC27.93■■■□□ 2.06
SNAPC4Q5SXM2 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC27.93■■■□□ 2.06
SNAPC4Q5SXM2 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC27.93■■■□□ 2.06
SNAPC4Q5SXM2 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC27.92■■■□□ 2.06
SNAPC4Q5SXM2 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC27.92■■■□□ 2.06
SNAPC4Q5SXM2 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC27.92■■■□□ 2.06
SNAPC4Q5SXM2 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC27.92■■■□□ 2.06
SNAPC4Q5SXM2 MIR658-201ENST00000385210 100 ntBASIC27.92■■■□□ 2.06
SNAPC4Q5SXM2 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC27.92■■■□□ 2.06
SNAPC4Q5SXM2 TMEM247-204ENST00000434431 680 ntAPPRIS P1 TSL 5 BASIC27.92■■■□□ 2.06
SNAPC4Q5SXM2 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC27.92■■■□□ 2.06
SNAPC4Q5SXM2 AC021054.1-202ENST00000543884 599 ntTSL 3 BASIC27.92■■■□□ 2.06
SNAPC4Q5SXM2 MRPL52-216ENST00000557221 922 ntTSL 2 BASIC27.92■■■□□ 2.06
SNAPC4Q5SXM2 NAA38-206ENST00000576384 424 ntTSL 2 BASIC27.92■■■□□ 2.06
SNAPC4Q5SXM2 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC27.92■■■□□ 2.06
SNAPC4Q5SXM2 AC084346.2-201ENST00000607097 949 ntBASIC27.92■■■□□ 2.06
SNAPC4Q5SXM2 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC27.92■■■□□ 2.06
SNAPC4Q5SXM2 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC27.92■■■□□ 2.06
SNAPC4Q5SXM2 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC27.92■■■□□ 2.06
SNAPC4Q5SXM2 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC27.92■■■□□ 2.06
SNAPC4Q5SXM2 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC27.92■■■□□ 2.06
SNAPC4Q5SXM2 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC27.91■■■□□ 2.06
SNAPC4Q5SXM2 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC27.91■■■□□ 2.06
SNAPC4Q5SXM2 SLC25A24-204ENST00000569674 2357 ntBASIC27.91■■■□□ 2.06
SNAPC4Q5SXM2 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC27.91■■■□□ 2.06
SNAPC4Q5SXM2 AL157832.1-201ENST00000428273 495 ntTSL 2 BASIC27.91■■■□□ 2.06
SNAPC4Q5SXM2 AC092658.1-201ENST00000505836 891 ntBASIC27.91■■■□□ 2.06
SNAPC4Q5SXM2 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC27.91■■■□□ 2.06
SNAPC4Q5SXM2 AP002008.1-201ENST00000530283 1155 ntTSL 1 (best) BASIC27.91■■■□□ 2.06
SNAPC4Q5SXM2 AC129507.3-201ENST00000571512 913 ntTSL 2 BASIC27.91■■■□□ 2.06
SNAPC4Q5SXM2 PRR29-204ENST00000577953 565 ntTSL 4 BASIC27.91■■■□□ 2.06
SNAPC4Q5SXM2 RAB34-223ENST00000636154 730 ntTSL 2 BASIC27.91■■■□□ 2.06
SNAPC4Q5SXM2 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC27.91■■■□□ 2.06
SNAPC4Q5SXM2 SLC22A20-204ENST00000530038 1673 ntBASIC27.91■■■□□ 2.06
SNAPC4Q5SXM2 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC27.91■■■□□ 2.06
SNAPC4Q5SXM2 FOXO1B-201ENST00000504678 1527 ntBASIC27.91■■■□□ 2.06
SNAPC4Q5SXM2 AL353732.1-201ENST00000569618 1459 ntBASIC27.91■■■□□ 2.06
Retrieved 100 of 98,524 protein–RNA pairs in 55.2 ms