Protein–RNA interactions for Protein: P83916

CBX1, Chromobox protein homolog 1, humanhuman

Predictions only

Length 185 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBX1P83916 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CBX1P83916 SLC25A37-206ENST00000519973 4823 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CBX1P83916 DIDO1-201ENST00000266070 8574 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
CBX1P83916 CCDC127-201ENST00000296824 9342 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CBX1P83916 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CBX1P83916 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC18.15■□□□□ 0.5
CBX1P83916 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
CBX1P83916 DEGS1-201ENST00000323699 2101 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CBX1P83916 TCP10-202ENST00000397829 2141 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
CBX1P83916 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
CBX1P83916 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
CBX1P83916 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC18.15■□□□□ 0.5
CBX1P83916 STOX2-205ENST00000513034 807 ntTSL 3 BASIC18.15■□□□□ 0.5
CBX1P83916 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CBX1P83916 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC18.15■□□□□ 0.5
CBX1P83916 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CBX1P83916 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CBX1P83916 MED15-202ENST00000292733 3252 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
CBX1P83916 UROS-202ENST00000368778 1556 ntTSL 2 BASIC18.15■□□□□ 0.5
CBX1P83916 NUDT16-203ENST00000537561 5943 ntTSL 5 BASIC18.15■□□□□ 0.5
CBX1P83916 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CBX1P83916 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CBX1P83916 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC18.15■□□□□ 0.5
CBX1P83916 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC18.15■□□□□ 0.5
CBX1P83916 LINC02012-201ENST00000608206 1725 ntBASIC18.15■□□□□ 0.5
CBX1P83916 KRT8P3-201ENST00000519669 1449 ntBASIC18.15■□□□□ 0.5
CBX1P83916 RPS6KL1-210ENST00000555647 3309 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
CBX1P83916 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC18.15■□□□□ 0.5
CBX1P83916 KRT8P9-201ENST00000558927 1449 ntBASIC18.15■□□□□ 0.5
CBX1P83916 COL5A1-208ENST00000618395 8437 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
CBX1P83916 NBEA-201ENST00000310336 10794 ntAPPRIS ALT1 TSL 1 (best) BASIC18.14■□□□□ 0.5
CBX1P83916 NBEA-208ENST00000629018 10791 ntAPPRIS ALT1 TSL 5 BASIC18.14■□□□□ 0.5
CBX1P83916 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC18.14■□□□□ 0.5
CBX1P83916 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC18.14■□□□□ 0.5
CBX1P83916 ARRDC4-201ENST00000268042 4072 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
CBX1P83916 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
CBX1P83916 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
CBX1P83916 KCNT1-207ENST00000487664 3845 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
CBX1P83916 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
CBX1P83916 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC18.14■□□□□ 0.49
CBX1P83916 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CBX1P83916 RCC2P3-201ENST00000418112 1537 ntBASIC18.14■□□□□ 0.49
CBX1P83916 TRPV4-201ENST00000261740 3233 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CBX1P83916 SLC35C2-204ENST00000372230 2246 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CBX1P83916 KIAA1683-209ENST00000612316 2684 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
CBX1P83916 TAF6-205ENST00000437822 2318 ntTSL 2 BASIC18.14■□□□□ 0.49
CBX1P83916 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC18.14■□□□□ 0.49
CBX1P83916 AC005264.1-201ENST00000587587 2319 ntTSL 2 BASIC18.14■□□□□ 0.49
CBX1P83916 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC18.14■□□□□ 0.49
CBX1P83916 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC18.14■□□□□ 0.49
CBX1P83916 TUBB8P6-201ENST00000436895 1288 ntBASIC18.14■□□□□ 0.49
CBX1P83916 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC18.14■□□□□ 0.49
CBX1P83916 SERP1-205ENST00000487153 657 ntTSL 4 BASIC18.14■□□□□ 0.49
CBX1P83916 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC18.14■□□□□ 0.49
CBX1P83916 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC18.14■□□□□ 0.49
CBX1P83916 UBE2DNL-204ENST00000602536 740 ntBASIC18.14■□□□□ 0.49
CBX1P83916 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
CBX1P83916 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
CBX1P83916 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC18.14■□□□□ 0.49
CBX1P83916 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC18.14■□□□□ 0.49
CBX1P83916 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
CBX1P83916 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
CBX1P83916 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CBX1P83916 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CBX1P83916 ACIN1-203ENST00000357481 2563 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
CBX1P83916 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CBX1P83916 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CBX1P83916 AL137784.3-201ENST00000623858 2288 ntBASIC18.14■□□□□ 0.49
CBX1P83916 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC18.14■□□□□ 0.49
CBX1P83916 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC18.14■□□□□ 0.49
CBX1P83916 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
CBX1P83916 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
CBX1P83916 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
CBX1P83916 ARL5B-201ENST00000377275 7196 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CBX1P83916 VWA7-201ENST00000375688 2881 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
CBX1P83916 PCDHA4-203ENST00000530339 5251 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CBX1P83916 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC18.13■□□□□ 0.49
CBX1P83916 IMPDH1-203ENST00000354269 2580 ntTSL 2 BASIC18.13■□□□□ 0.49
CBX1P83916 UBTF-201ENST00000302904 4997 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
CBX1P83916 APBB1-221ENST00000609360 2642 ntAPPRIS ALT1 TSL 5 BASIC18.13■□□□□ 0.49
CBX1P83916 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC18.13■□□□□ 0.49
CBX1P83916 SUGP2-202ENST00000337018 3640 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
CBX1P83916 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
CBX1P83916 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC18.13■□□□□ 0.49
CBX1P83916 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CBX1P83916 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC18.13■□□□□ 0.49
CBX1P83916 AC010491.1-201ENST00000563101 2797 ntBASIC18.13■□□□□ 0.49
CBX1P83916 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
CBX1P83916 TFG-210ENST00000620299 1289 ntTSL 5 BASIC18.13■□□□□ 0.49
CBX1P83916 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC18.13■□□□□ 0.49
CBX1P83916 TMPRSS3-204ENST00000433957 2403 ntAPPRIS ALT1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CBX1P83916 SLC8B1-201ENST00000202831 2975 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
CBX1P83916 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CBX1P83916 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
CBX1P83916 TC2N-201ENST00000340892 4708 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CBX1P83916 BICDL1-201ENST00000397558 3055 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
CBX1P83916 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
CBX1P83916 SDHAP2-201ENST00000455183 2001 ntBASIC18.13■□□□□ 0.49
CBX1P83916 TMED5-202ENST00000370282 6104 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CBX1P83916 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC18.13■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 68.8 ms