Protein–RNA interactions for Protein: P55316

FOXG1, Forkhead box protein G1, humanhuman

Predicted RBP Predictions only

Length 489 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXG1P55316 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC15.21■□□□□ 0.02
FOXG1P55316 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC15.21■□□□□ 0.02
FOXG1P55316 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
FOXG1P55316 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
FOXG1P55316 BANP-227ENST00000626016 2144 ntTSL 2 BASIC15.2■□□□□ 0.02
FOXG1P55316 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
FOXG1P55316 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC15.2■□□□□ 0.02
FOXG1P55316 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC15.2■□□□□ 0.02
FOXG1P55316 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
FOXG1P55316 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
FOXG1P55316 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC15.2■□□□□ 0.02
FOXG1P55316 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
FOXG1P55316 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
FOXG1P55316 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
FOXG1P55316 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC15.2■□□□□ 0.02
FOXG1P55316 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
FOXG1P55316 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
FOXG1P55316 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC15.2■□□□□ 0.02
FOXG1P55316 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
FOXG1P55316 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC15.2■□□□□ 0.02
FOXG1P55316 AC093909.1-201ENST00000504731 1122 ntBASIC15.2■□□□□ 0.02
FOXG1P55316 IGHV3-22-201ENST00000520721 359 ntBASIC15.2■□□□□ 0.02
FOXG1P55316 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC15.2■□□□□ 0.02
FOXG1P55316 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC15.2■□□□□ 0.02
FOXG1P55316 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
FOXG1P55316 RPL18-209ENST00000550645 463 ntTSL 5 BASIC15.2■□□□□ 0.02
FOXG1P55316 RPL18-214ENST00000552588 559 ntTSL 3 BASIC15.2■□□□□ 0.02
FOXG1P55316 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC15.2■□□□□ 0.02
FOXG1P55316 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC15.2■□□□□ 0.02
FOXG1P55316 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC15.2■□□□□ 0.02
FOXG1P55316 AC006557.2-201ENST00000592985 1240 ntBASIC15.2■□□□□ 0.02
FOXG1P55316 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
FOXG1P55316 AL356488.2-201ENST00000602755 427 ntBASIC15.2■□□□□ 0.02
FOXG1P55316 BX640515.1-201ENST00000617215 977 ntBASIC15.2■□□□□ 0.02
FOXG1P55316 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
FOXG1P55316 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
FOXG1P55316 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC15.2■□□□□ 0.02
FOXG1P55316 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
FOXG1P55316 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
FOXG1P55316 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
FOXG1P55316 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
FOXG1P55316 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC15.2■□□□□ 0.02
FOXG1P55316 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
FOXG1P55316 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC15.2■□□□□ 0.02
FOXG1P55316 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
FOXG1P55316 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
FOXG1P55316 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC15.2■□□□□ 0.02
FOXG1P55316 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
FOXG1P55316 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC15.19■□□□□ 0.02
FOXG1P55316 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
FOXG1P55316 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
FOXG1P55316 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC15.19■□□□□ 0.02
FOXG1P55316 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC15.19■□□□□ 0.02
FOXG1P55316 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC15.19■□□□□ 0.02
FOXG1P55316 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
FOXG1P55316 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC15.19■□□□□ 0.02
FOXG1P55316 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
FOXG1P55316 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
FOXG1P55316 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC15.19■□□□□ 0.02
FOXG1P55316 ACTG1P4-201ENST00000425123 1122 ntBASIC15.19■□□□□ 0.02
FOXG1P55316 ARTN-206ENST00000472435 402 ntTSL 3 BASIC15.19■□□□□ 0.02
FOXG1P55316 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC15.19■□□□□ 0.02
FOXG1P55316 RPS29-206ENST00000557111 488 ntTSL 2 BASIC15.19■□□□□ 0.02
FOXG1P55316 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC15.19■□□□□ 0.02
FOXG1P55316 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC15.19■□□□□ 0.02
FOXG1P55316 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
FOXG1P55316 AF228730.7-201ENST00000641842 219 ntBASIC15.19■□□□□ 0.02
FOXG1P55316 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
FOXG1P55316 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
FOXG1P55316 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
FOXG1P55316 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
FOXG1P55316 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
FOXG1P55316 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
FOXG1P55316 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
FOXG1P55316 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC15.19■□□□□ 0.02
FOXG1P55316 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
FOXG1P55316 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
FOXG1P55316 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
FOXG1P55316 AL590787.1-201ENST00000568856 1315 ntBASIC15.18■□□□□ 0.02
FOXG1P55316 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
FOXG1P55316 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
FOXG1P55316 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
FOXG1P55316 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
FOXG1P55316 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC15.18■□□□□ 0.02
FOXG1P55316 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
FOXG1P55316 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC15.18■□□□□ 0.02
FOXG1P55316 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
FOXG1P55316 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC15.18■□□□□ 0.02
FOXG1P55316 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC15.18■□□□□ 0.02
FOXG1P55316 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
FOXG1P55316 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
FOXG1P55316 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
FOXG1P55316 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
FOXG1P55316 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
FOXG1P55316 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC15.18■□□□□ 0.02
FOXG1P55316 AL022342.1-201ENST00000400363 863 ntBASIC15.18■□□□□ 0.02
FOXG1P55316 PTCHD3P3-201ENST00000403073 906 ntBASIC15.18■□□□□ 0.02
FOXG1P55316 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
FOXG1P55316 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC15.18■□□□□ 0.02
FOXG1P55316 RNA5SP415-201ENST00000517246 115 ntBASIC15.18■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 29.6 ms