Protein–RNA interactions for Protein: P23025

XPA, DNA repair protein complementing XP-A cells, humanhuman

Predicted RBP Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XPAP23025 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
XPAP23025 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
XPAP23025 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC17.54■□□□□ 0.4
XPAP23025 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
XPAP23025 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
XPAP23025 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
XPAP23025 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
XPAP23025 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC17.53■□□□□ 0.4
XPAP23025 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC17.53■□□□□ 0.4
XPAP23025 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC17.53■□□□□ 0.4
XPAP23025 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
XPAP23025 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC17.53■□□□□ 0.4
XPAP23025 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
XPAP23025 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
XPAP23025 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC17.53■□□□□ 0.4
XPAP23025 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
XPAP23025 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
XPAP23025 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC17.53■□□□□ 0.4
XPAP23025 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
XPAP23025 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC17.53■□□□□ 0.4
XPAP23025 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
XPAP23025 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC17.53■□□□□ 0.4
XPAP23025 SDCCAG3P1-201ENST00000589292 1150 ntBASIC17.53■□□□□ 0.4
XPAP23025 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
XPAP23025 AC006557.2-201ENST00000592985 1240 ntBASIC17.53■□□□□ 0.4
XPAP23025 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC17.53■□□□□ 0.4
XPAP23025 MIR1199-201ENST00000621445 119 ntBASIC17.53■□□□□ 0.4
XPAP23025 AC107918.4-202ENST00000641623 219 ntBASIC17.53■□□□□ 0.4
XPAP23025 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC17.53■□□□□ 0.4
XPAP23025 AC148477.5-201ENST00000625164 1645 ntBASIC17.53■□□□□ 0.4
XPAP23025 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
XPAP23025 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
XPAP23025 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
XPAP23025 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
XPAP23025 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
XPAP23025 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
XPAP23025 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC17.52■□□□□ 0.4
XPAP23025 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
XPAP23025 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC17.52■□□□□ 0.4
XPAP23025 AC008764.6-201ENST00000595909 2069 ntBASIC17.52■□□□□ 0.4
XPAP23025 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
XPAP23025 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
XPAP23025 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC17.52■□□□□ 0.4
XPAP23025 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC17.52■□□□□ 0.4
XPAP23025 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
XPAP23025 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC17.52■□□□□ 0.4
XPAP23025 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
XPAP23025 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
XPAP23025 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC17.52■□□□□ 0.4
XPAP23025 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
XPAP23025 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
XPAP23025 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC17.52■□□□□ 0.4
XPAP23025 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
XPAP23025 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC17.52■□□□□ 0.4
XPAP23025 LITAF-211ENST00000572255 516 ntTSL 4 BASIC17.52■□□□□ 0.4
XPAP23025 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC17.52■□□□□ 0.4
XPAP23025 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC17.52■□□□□ 0.4
XPAP23025 CYB561-217ENST00000582997 877 ntTSL 5 BASIC17.52■□□□□ 0.4
XPAP23025 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC17.52■□□□□ 0.4
XPAP23025 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
XPAP23025 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
XPAP23025 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
XPAP23025 NCF1C-201ENST00000438382 1427 ntBASIC17.52■□□□□ 0.4
XPAP23025 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
XPAP23025 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC17.52■□□□□ 0.4
XPAP23025 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.39
XPAP23025 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.39
XPAP23025 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.39
XPAP23025 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.39
XPAP23025 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC17.52■□□□□ 0.39
XPAP23025 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
XPAP23025 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
XPAP23025 CD276-203ENST00000537340 2439 ntTSL 2 BASIC17.51■□□□□ 0.39
XPAP23025 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
XPAP23025 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC17.51■□□□□ 0.39
XPAP23025 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
XPAP23025 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC17.51■□□□□ 0.39
XPAP23025 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
XPAP23025 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
XPAP23025 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
XPAP23025 AL355312.1-201ENST00000407115 2176 ntBASIC17.51■□□□□ 0.39
XPAP23025 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC17.51■□□□□ 0.39
XPAP23025 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC17.51■□□□□ 0.39
XPAP23025 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC17.51■□□□□ 0.39
XPAP23025 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
XPAP23025 AC092910.1-201ENST00000482027 1129 ntBASIC17.51■□□□□ 0.39
XPAP23025 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
XPAP23025 GATB-213ENST00000515812 1893 ntTSL 5 BASIC17.51■□□□□ 0.39
XPAP23025 AC105339.3-201ENST00000560043 636 ntBASIC17.51■□□□□ 0.39
XPAP23025 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
XPAP23025 AL049840.3-201ENST00000602669 611 ntBASIC17.51■□□□□ 0.39
XPAP23025 AL139327.4-201ENST00000612362 153 ntBASIC17.51■□□□□ 0.39
XPAP23025 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
XPAP23025 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC17.51■□□□□ 0.39
XPAP23025 AL589182.2-201ENST00000619332 1049 ntBASIC17.51■□□□□ 0.39
XPAP23025 AC008735.5-201ENST00000623544 497 ntBASIC17.51■□□□□ 0.39
XPAP23025 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC17.51■□□□□ 0.39
XPAP23025 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
XPAP23025 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC17.51■□□□□ 0.39
XPAP23025 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC17.51■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 34 ms