Protein–RNA interactions for Protein: P19256

CD58, Lymphocyte function-associated antigen 3, humanhuman

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD58P19256 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC18.66■□□□□ 0.58
CD58P19256 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CD58P19256 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CD58P19256 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC18.65■□□□□ 0.58
CD58P19256 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC18.65■□□□□ 0.58
CD58P19256 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
CD58P19256 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CD58P19256 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CD58P19256 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CD58P19256 TLE1-202ENST00000376484 666 ntTSL 3 BASIC18.65■□□□□ 0.58
CD58P19256 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC18.65■□□□□ 0.58
CD58P19256 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC18.65■□□□□ 0.58
CD58P19256 AL020989.1-201ENST00000422979 469 ntBASIC18.65■□□□□ 0.58
CD58P19256 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC18.65■□□□□ 0.58
CD58P19256 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC18.65■□□□□ 0.58
CD58P19256 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC18.65■□□□□ 0.58
CD58P19256 BMF-207ENST00000559701 630 ntTSL 3 BASIC18.65■□□□□ 0.58
CD58P19256 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC18.65■□□□□ 0.58
CD58P19256 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC18.65■□□□□ 0.58
CD58P19256 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CD58P19256 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CD58P19256 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CD58P19256 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CD58P19256 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
CD58P19256 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
CD58P19256 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CD58P19256 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
CD58P19256 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
CD58P19256 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC18.64■□□□□ 0.58
CD58P19256 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
CD58P19256 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
CD58P19256 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC18.64■□□□□ 0.58
CD58P19256 AC079776.2-201ENST00000641154 1609 ntBASIC18.64■□□□□ 0.57
CD58P19256 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC18.64■□□□□ 0.57
CD58P19256 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC18.64■□□□□ 0.57
CD58P19256 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
CD58P19256 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CD58P19256 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CD58P19256 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC18.64■□□□□ 0.57
CD58P19256 FGFR3P6-201ENST00000457012 610 ntBASIC18.64■□□□□ 0.57
CD58P19256 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CD58P19256 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CD58P19256 COX5A-202ENST00000562233 441 ntTSL 3 BASIC18.64■□□□□ 0.57
CD58P19256 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC18.64■□□□□ 0.57
CD58P19256 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CD58P19256 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CD58P19256 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.57
CD58P19256 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CD58P19256 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
CD58P19256 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC18.64■□□□□ 0.57
CD58P19256 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CD58P19256 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC18.64■□□□□ 0.57
CD58P19256 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CD58P19256 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
CD58P19256 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CD58P19256 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
CD58P19256 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CD58P19256 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CD58P19256 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
CD58P19256 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CD58P19256 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
CD58P19256 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CD58P19256 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC18.63■□□□□ 0.57
CD58P19256 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC18.63■□□□□ 0.57
CD58P19256 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CD58P19256 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CD58P19256 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC18.63■□□□□ 0.57
CD58P19256 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CD58P19256 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
CD58P19256 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CD58P19256 AL356309.3-201ENST00000624132 1934 ntBASIC18.63■□□□□ 0.57
CD58P19256 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CD58P19256 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CD58P19256 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC18.63■□□□□ 0.57
CD58P19256 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC18.63■□□□□ 0.57
CD58P19256 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC18.63■□□□□ 0.57
CD58P19256 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CD58P19256 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
CD58P19256 SART3-203ENST00000546611 1184 ntBASIC18.63■□□□□ 0.57
CD58P19256 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC18.63■□□□□ 0.57
CD58P19256 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CD58P19256 NKAPP1-205ENST00000585790 367 ntBASIC18.63■□□□□ 0.57
CD58P19256 COPE-211ENST00000600932 1144 ntTSL 5 BASIC18.63■□□□□ 0.57
CD58P19256 AL691432.3-201ENST00000621860 400 ntBASIC18.63■□□□□ 0.57
CD58P19256 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
CD58P19256 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CD58P19256 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CD58P19256 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC18.63■□□□□ 0.57
CD58P19256 AC080080.1-201ENST00000625121 2420 ntBASIC18.63■□□□□ 0.57
CD58P19256 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CD58P19256 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC18.63■□□□□ 0.57
CD58P19256 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC18.63■□□□□ 0.57
CD58P19256 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
CD58P19256 AC020916.1-201ENST00000587762 1774 ntBASIC18.63■□□□□ 0.57
CD58P19256 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CD58P19256 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC18.62■□□□□ 0.57
CD58P19256 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CD58P19256 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
CD58P19256 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CD58P19256 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC18.62■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 48.7 ms